RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 RIMBP3CA6NJZ7 1639 aa3.73□□□□□ -1.81
PTPN11-203ENST00000530818 RIMBP3BA6NNM3 1639 aa3.73□□□□□ -1.81
PTPN11-203ENST00000530818 RIMBP3Q9UFD9 1639 aa3.73□□□□□ -1.81
PTPN11-203ENST00000530818 BTBD11A6QL63 1104 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 H7C1D1 291 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 ELL2O00472 640 aaPredicted RBP3.72□□□□□ -1.81
PTPN11-203ENST00000530818 ECE1P42892 770 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 RGS3P49796 1198 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 SCNN1BP51168 640 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 CD83Q01151 205 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 AMPD3Q01432 767 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 ALDH6A1Q02252 535 aaKnown RBP3.72□□□□□ -1.81
PTPN11-203ENST00000530818 STRN3Q13033 797 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 DHCR24Q15392 516 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 TTLL7Q6ZT98 887 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 CMIPQ8IY22 773 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 EFHBQ8N7U6 833 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 ZSCAN18Q8TBC5 510 aaPredicted RBP3.72□□□□□ -1.81
PTPN11-203ENST00000530818 FEZF2Q8TBJ5 459 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 RTF1Q92541 710 aaKnown RBP3.72□□□□□ -1.81
PTPN11-203ENST00000530818 ERCC4Q92889 916 aaPredicted RBP3.72□□□□□ -1.81
PTPN11-203ENST00000530818 CLIC6Q96NY7 704 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 BTBD2Q9BX70 525 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 EMC7Q9NPA0 242 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 NTMQ9P121 344 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 ARHGAP28Q9P2N2 729 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 ZKSCAN5Q9Y2L8 839 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 PTPN22Q9Y2R2 807 aa3.72□□□□□ -1.81
PTPN11-203ENST00000530818 GAS7O60861 476 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 HIP1RO75146 1068 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 PRLP01236 227 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 CYP17A1P05093 508 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 LSSP48449 732 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 KCNC1P48547 511 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 FNTBP49356 437 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 MOGSQ13724 837 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 MYBPC3Q14896 1274 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 PDCD1Q15116 288 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 EPHA7Q15375 998 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 TERF2Q15554 542 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 BROXQ5VW32 411 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 TRMT10BQ6PF06 316 aaKnown RBP3.71□□□□□ -1.82
PTPN11-203ENST00000530818 LARP4Q71RC2 724 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTPN11-203ENST00000530818 KANSL1Q7Z3B3 1105 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 FILIP1Q7Z7B0 1213 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 ZDHHC14Q8IZN3 488 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 HIPK4Q8NE63 616 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 GPATCH3Q96I76 525 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 KATNBL1Q9H079 304 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 SLKQ9H2G2 1235 aaPredicted RBP3.71□□□□□ -1.82
PTPN11-203ENST00000530818 PRDM12Q9H4Q4 367 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 LUC7LQ9NQ29 371 aaKnown RBP3.71□□□□□ -1.82
PTPN11-203ENST00000530818 TOMM22Q9NS69 142 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 TMPRSS11EQ9UL52 423 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 PHLDB1Q86UU1 1377 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 MRC2Q9UBG0 1479 aa3.71□□□□□ -1.82
PTPN11-203ENST00000530818 ARID1BQ8NFD5 2236 aaPredicted RBP3.71□□□□□ -1.82
PTPN11-203ENST00000530818 WDR62O43379 1518 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 URB2Q14146 1524 aaKnown RBP3.7□□□□□ -1.82
PTPN11-203ENST00000530818 PRICKLE3O43900 615 aaPredicted RBP3.7□□□□□ -1.82
PTPN11-203ENST00000530818 B4GALT3O60512 393 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 APPP05067 770 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 KPNA1P52294 538 aaPredicted RBP3.7□□□□□ -1.82
PTPN11-203ENST00000530818 PHC1P78364 1004 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 TOP3AQ13472 1001 aaPredicted RBP3.7□□□□□ -1.82
PTPN11-203ENST00000530818 LRRC32Q14392 662 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 NOLC1Q14978 699 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTPN11-203ENST00000530818 ZNF174Q15697 407 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 TBR1Q16650 682 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 RGL3Q3MIN7 710 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 FBLN7Q53RD9 439 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 NT5DC1Q5TFE4 455 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 Q6ZUG5 572 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 DDX42Q86XP3 938 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTPN11-203ENST00000530818 LYSMD2Q8IV50 215 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 OR2W6PQ8NHA6 318 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 CHAC2Q8WUX2 184 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 AJUBAQ96IF1 538 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 MAML3Q96JK9 1138 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 FOXB1Q99853 325 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 TRIM8Q9BZR9 551 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 OR10A5Q9H207 317 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTPN11-203ENST00000530818 SPC25Q9HBM1 224 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 PARD6AQ9NPB6 346 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 MAGEL2Q9UJ55 1249 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 CDC42EP3Q9UKI2 254 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 PRKAB1Q9Y478 270 aa3.7□□□□□ -1.82
PTPN11-203ENST00000530818 ZNF608Q9ULD9 1512 aaPredicted RBP3.7□□□□□ -1.82
PTPN11-203ENST00000530818 FANCD2Q9BXW9 1451 aa3.69□□□□□ -1.82
PTPN11-203ENST00000530818 A0A0A6YYK5 440 aaPredicted RBP3.69□□□□□ -1.82
PTPN11-203ENST00000530818 A0A0G2JLL6 359 aaPredicted RBP3.69□□□□□ -1.82
PTPN11-203ENST00000530818 MROH6A6NGR9 719 aa3.69□□□□□ -1.82
PTPN11-203ENST00000530818 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
PTPN11-203ENST00000530818 H0Y858 1186 aa3.69□□□□□ -1.82
PTPN11-203ENST00000530818 ZEB2O60315 1214 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms