RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 RGS3P49796 1198 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 RBM5P52756 815 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 CACNB3P54284 484 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 DYNLL1P63167 89 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 CCDC85BQ15834 202 aaPredicted RBP10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 CDH24Q86UP0 819 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 TICAM2Q86XR7 235 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 MIGA1Q8NAN2 632 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 OSBP2Q969R2 916 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 FSD1Q9BTV5 496 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 IDI2Q9BXS1 227 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 KRTAP4-2Q9BYR5 136 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 SSC5DA1L4H1 1573 aa10.5□□□□□ -0.73
CCDC90B-217ENST00000530253 COL2A1P02458 1487 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 FOCADQ5VW36 1801 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 CDK5RAP2Q96SN8 1893 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 ADM5C9JUS6 153 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 HPXP02790 462 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 PGRP06401 933 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 ZFYP08048 801 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 BMP2KLQ5H9B9 411 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 FKBP1CQ5VVH2 108 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 ZSCAN25Q6NSZ9 544 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 ATG14Q6ZNE5 492 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 LCORLQ8N3X6 602 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 SH3RF3Q8TEJ3 882 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 APPBP2Q92624 585 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 GLIS2Q9BZE0 524 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 PUS7LQ9H0K6 701 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 DDX4Q9NQI0 724 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 USP40Q9NVE5 1235 aa10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 AATFQ9NY61 560 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 SCAF8Q9UPN6 1271 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 RPAP1Q9BWH6 1393 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-217ENST00000530253 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 A0A0D9SFI3 127 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 M0R2C6 588 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 GFRA2O00451 464 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 MYO1BO43795 1136 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 MBD4O95243 580 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 ESR1P03372 595 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 SRFP11831 508 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 HK2P52789 917 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 RALGPS1Q5JS13 557 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 APOBEC3FQ8IUX4 373 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 RILPL2Q969X0 211 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 TMEM87BQ96K49 555 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 FAM227BQ96M60 508 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 TEPSINQ96N21 525 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 SEC62Q99442 399 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 ATRNL1Q5VV63 1379 aa10.48□□□□□ -0.73
CCDC90B-217ENST00000530253 TRPM7Q96QT4 1865 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 AK9Q5TCS8 1911 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 TCP10L2B9ZVM9 353 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 FOXP2O15409 715 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 BAG3O95817 575 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 GNA15P30679 374 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 CDK8P49336 464 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 NMIQ13287 307 aaPredicted RBP10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 CST9Q5W186 159 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 TTLL10Q6ZVT0 673 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 KRT26Q7Z3Y9 468 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 USP48Q86UV5 1035 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 FAM83AQ86UY5 434 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 CERS3Q8IU89 383 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 CREG2Q8IUH2 290 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 ZFPM1Q8IX07 1006 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 JMYQ8N9B5 988 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 DCPSQ96C86 337 aaKnown RBP10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 STRBPQ96SI9 672 aaKnown RBP10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 MIR1-1HGQ9H1L0 117 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 IL25Q9H293 177 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 ARMT1Q9H993 441 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 VEZTQ9HBM0 779 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 GPATCH2Q9NW75 528 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 ADAM30Q9UKF2 790 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 PPP2R3BQ9Y5P8 575 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 FLT1P17948 1338 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 PAPPA2Q9BXP8 1791 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 SIPA1L1O43166 1804 aa10.47□□□□□ -0.73
CCDC90B-217ENST00000530253 KRTAP9-7A8MTY7 169 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 PRKAB2O43741 272 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 ENTPD3O75355 529 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 CHMLP26374 656 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 SEPT6Q14141 434 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 RASA3Q14644 834 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 LRRFIP1Q32MZ4 808 aaKnown RBP10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 TEX11Q8IYF3 940 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 LILRA2Q8N149 483 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 FAM151AQ8WW52 585 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 CDCA5Q96FF9 252 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 TMEM39BQ9GZU3 492 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 OSBPL5Q9H0X9 879 aaPredicted RBP10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 DEFB129Q9H1M3 183 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 TJP2Q9UDY2 1190 aa10.46□□□□□ -0.73
CCDC90B-217ENST00000530253 NAV1Q8NEY1 1877 aa10.46□□□□□ -0.74
CCDC90B-217ENST00000530253 GPAA1O43292 621 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 TPP2P29144 1249 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 TNFAIP1Q13829 316 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms