RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 MFSD3Q96ES6 412 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 IER2Q9BTL4 223 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 NOL6Q9H6R4 1146 aaKnown RBP8.76□□□□□ -1.01
SVIP-204ENST00000530199 PRDM5Q9NQX1 630 aaPredicted RBP8.76□□□□□ -1.01
SVIP-204ENST00000530199 FZD1Q9UP38 647 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 MUC6Q6W4X9 2439 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 DNAJC25-GNG10A0A024R161 153 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 KCNH1O95259 989 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 TFRCP02786 760 aaKnown RBP8.75□□□□□ -1.01
SVIP-204ENST00000530199 FOSL2P15408 326 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 SYN1P17600 705 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 CTGFP29279 349 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 GPSM2P81274 684 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 AMPD3Q01432 767 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 FNDC3BQ53EP0 1204 aaKnown RBP8.75□□□□□ -1.01
SVIP-204ENST00000530199 SFRP5Q5T4F7 317 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 GPAT2Q6NUI2 795 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 KIF6Q6ZMV9 814 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 DHX37Q8IY37 1157 aaKnown RBP8.75□□□□□ -1.01
SVIP-204ENST00000530199 FAM43AQ8N2R8 423 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 FIBCD1Q8N539 461 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 BTN2A2Q8WVV5 523 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 Q96M66 194 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 CLUHP3Q96NS8 147 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 FAM83CQ9BQN1 747 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 UTP14AQ9BVJ6 771 aaKnown RBP8.75□□□□□ -1.01
SVIP-204ENST00000530199 SSBP4Q9BWG4 385 aaPredicted RBP8.75□□□□□ -1.01
SVIP-204ENST00000530199 MRPL4Q9BYD3 311 aaKnown RBP8.75□□□□□ -1.01
SVIP-204ENST00000530199 PAK6Q9NQU5 681 aaPredicted RBP8.75□□□□□ -1.01
SVIP-204ENST00000530199 GFOD1Q9NXC2 390 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 PPP2R3BQ9Y5P8 575 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 ADGRA2Q96PE1 1338 aa8.75□□□□□ -1.01
SVIP-204ENST00000530199 HMOX1P09601 288 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 GTF2A2P52657 109 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 INSM1Q01101 510 aaPredicted RBP8.74□□□□□ -1.01
SVIP-204ENST00000530199 GRB10Q13322 594 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 PPP2R5DQ14738 602 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 GTF2IRD2BQ6EKJ0 949 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 C17orf99Q6UX52 265 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 TTLL7Q6ZT98 887 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 TMC3Q7Z5M5 1100 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 GTF2IRD2Q86UP8 949 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 DTWD2Q8NBA8 298 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 GATA6Q92908 595 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 ZBED3Q96IU2 234 aaPredicted RBP8.74□□□□□ -1.01
SVIP-204ENST00000530199 UHRF1Q96T88 793 aaPredicted RBP8.74□□□□□ -1.01
SVIP-204ENST00000530199 LRFN3Q9BTN0 628 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 DEFB129Q9H1M3 183 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 KCNH3Q9ULD8 1083 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 MYPNQ86TC9 1320 aa8.74□□□□□ -1.01
SVIP-204ENST00000530199 CCL15-CCL14A0A0B4J2E2 113 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 IRS4O14654 1257 aaPredicted RBP8.73□□□□□ -1.01
SVIP-204ENST00000530199 USP2O75604 605 aaPredicted RBP8.73□□□□□ -1.01
SVIP-204ENST00000530199 CBX7O95931 251 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 KIR3DL1P43629 444 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 PSMC4P43686 418 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 CCL15Q16663 113 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 OGFOD3Q6PK18 319 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 OPTNQ96CV9 577 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 DEFB118Q96PH6 123 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 ASB2Q96Q27 587 aa8.73□□□□□ -1.01
SVIP-204ENST00000530199 TTYH1Q9H313 450 aaPredicted RBP8.73□□□□□ -1.01
SVIP-204ENST00000530199 COL3A1P02461 1466 aaPredicted RBP8.72□□□□□ -1.01
SVIP-204ENST00000530199 A0A087X0B3 334 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 SIGLEC6O43699 453 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 DLX3O60479 287 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 MYCLP1P12525 358 aaPredicted RBP8.72□□□□□ -1.01
SVIP-204ENST00000530199 HOXC12P31275 282 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 ADMP35318 185 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 CHRNA4P43681 627 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 MRE11P49959 708 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 SF1Q15637 639 aaKnown RBP8.72□□□□□ -1.01
SVIP-204ENST00000530199 SUPT20HL1Q3ZLR7 823 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 C22orf34Q6ZV56 151 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 THNSL2Q86YJ6 484 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 USP38Q8NB14 1042 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 DIS3LQ8TF46 1054 aaKnown RBP8.72□□□□□ -1.01
SVIP-204ENST00000530199 CELF1Q92879 486 aaKnown RBP8.72□□□□□ -1.01
SVIP-204ENST00000530199 CCDC140Q96MF4 163 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 HEXIM2Q96MH2 286 aaKnown RBP8.72□□□□□ -1.01
SVIP-204ENST00000530199 ZDHHC15Q96MV8 337 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 DSCC1Q9BVC3 393 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 NKX2-4Q9H2Z4 354 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 SF3B6Q9Y3B4 125 aaKnown RBP8.72□□□□□ -1.01
SVIP-204ENST00000530199 MYO3BQ8WXR4 1341 aa8.72□□□□□ -1.01
SVIP-204ENST00000530199 RAB11FIP3O75154 756 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 SASH1O94885 1247 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 PRAMEF1O95521 474 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 C6orf222P0C671 652 aaPredicted RBP8.71□□□□□ -1.02
SVIP-204ENST00000530199 GFRA1P56159 465 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 PRKCZQ05513 592 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 NMIQ13287 307 aaPredicted RBP8.71□□□□□ -1.02
SVIP-204ENST00000530199 TRIM61Q5EBN2 209 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 ZAR1Q86SH2 424 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 RPUSD2Q8IZ73 545 aaKnown RBP8.71□□□□□ -1.02
SVIP-204ENST00000530199 TBC1D32Q96NH3 1257 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 CHST7Q9NS84 486 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 GTF2IRD1Q9UHL9 959 aa8.71□□□□□ -1.02
SVIP-204ENST00000530199 HMX2A2RU54 273 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 PRR33A8MZF0 331 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms