RNA–Protein interactions for RNA: ENST00000529923.1

UBQLN1-205, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-205ENST00000529923 STXBP3O00186 592 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 SCAMP3O14828 347 aaKnown RBP3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 FOXN1O15353 648 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 PRICKLE3O43900 615 aaPredicted RBP3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 PPP1R11O60927 126 aaPredicted RBP3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 PLA2G1BP04054 148 aaKnown RBP3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 EPHX1P07099 455 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 ASGR2P07307 311 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 GLI4P10075 376 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 MC3RP41968 323 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 PIP4K2AP48426 406 aaPredicted RBP3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 GIPRP48546 466 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 AMPD2Q01433 879 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 PPP2R5EQ16537 467 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 CRY2Q49AN0 593 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 VWA3BQ502W6 1294 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 CC2D1BQ5T0F9 858 aaKnown RBP3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 CLEC4GQ6UXB4 293 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 CPNE8Q86YQ8 564 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 ARHGEF39Q8N4T4 335 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 CNBD1Q8NA66 436 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 USP33Q8TEY7 942 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 ZNF622Q969S3 477 aaKnown RBP eCLIP3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 MASTLQ96GX5 879 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 TAOK3Q9H2K8 898 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 BCAS3Q9H6U6 928 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 SUGT1Q9Y2Z0 365 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 RWDD3Q9Y3V2 267 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 CNTNAP1P78357 1384 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 UBR3Q6ZT12 1888 aa3.5□□□□□ -1.85
UBQLN1-205ENST00000529923 ZNF541Q9H0D2 1346 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 SNRPA1P09661 255 aaKnown RBP3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 NPR1P16066 1061 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 PAMP19021 973 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 PMLP29590 882 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 PRKAR2BP31323 418 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 SOX9P48436 509 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 TEFQ10587 303 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 SLC9A5Q14940 896 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 RTP5Q14D33 572 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 HLFQ16534 295 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 UBXN11Q5T124 520 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 NT5DC1Q5TFE4 455 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 LIPIQ6XZB0 460 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 MCM10Q7L590 875 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 LRP10Q7Z4F1 713 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 B3GNT8Q7Z7M8 397 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 SAPCD2Q86UD0 394 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 TTC5Q8N0Z6 440 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 OR6P1Q8NGX9 317 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 GPRASP2Q96D09 838 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 PEX11GQ96HA9 241 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 RCC1LQ96I51 464 aaKnown RBP3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 SPATA25Q9BR10 227 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 BDH2Q9BUT1 245 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 ZNF277Q9NRM2 450 aaPredicted RBP3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 USP40Q9NVE5 1235 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 GULP1Q9UBP9 304 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 NUDT5Q9UKK9 219 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 JAG2Q9Y219 1238 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 BACE2Q9Y5Z0 518 aa3.49□□□□□ -1.85
UBQLN1-205ENST00000529923 RGPD2P0DJD1 1756 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 TRBV23OR9-2A0A075B6M9 112 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 NPHP3-ACAD11A0A0J9YXS1 232 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 SH3D21A4FU49 640 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 IQCA1LA6NCM1 817 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 RASSF10A6NK89 507 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 ERVV-1B6SEH8 477 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 U2SURPO15042 1029 aaKnown RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 HTATSF1O43719 755 aaKnown RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 ADRB1P08588 477 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 HSPA8P11142 646 aaKnown RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 PPP2R1AP30153 589 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 MFAP1P55081 439 aaKnown RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 ST5P78524 1137 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 GRB10Q13322 594 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 DCTN1Q14203 1278 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 CCDC93Q567U6 631 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 ZFYVE27Q5T4F4 411 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 SOGA3Q5TF21 947 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 CST9Q5W186 159 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 KIAA1211LQ6NV74 962 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 FERMT3Q86UX7 667 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 METTL16Q86W50 562 aaKnown RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 NBPF5PQ86XG9 351 aaPredicted RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 RTKN2Q8IZC4 609 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 SYNE4Q8N205 404 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 C19orf47Q8N9M1 422 aaKnown RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 NETO2Q8NC67 525 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 SMARCC2Q8TAQ2 1214 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 CPLX3Q8WVH0 158 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 KLHL6Q8WZ60 621 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 TSPAN17Q96FV3 270 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 PLEKHF1Q96S99 279 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 PSMD1Q99460 953 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 MTA3Q9BTC8 594 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 MIS18AQ9NYP9 233 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 FBLN5Q9UBX5 448 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 CGGBP1Q9UFW8 167 aaPredicted RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 AKT3Q9Y243 479 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms