RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 FBXO47Q5MNV8 452 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 IER5Q5VY09 327 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 PIK3AP1Q6ZUJ8 805 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 TRAPPC12Q8WVT3 735 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 ASB2Q96Q27 587 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 UIMC1Q96RL1 719 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 CDY2AQ9Y6F7 541 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 ARID2Q68CP9 1835 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 TTC3P53804 2025 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 KLRC1P26715 233 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 NR5A1Q13285 461 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 PPP2R5CQ13362 524 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 LPIN1Q14693 890 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 KRT40Q6A162 431 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 TSHZ1Q6ZSZ6 1077 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 CCDC83Q8IWF9 413 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 UHRF1Q96T88 793 aaPredicted RBP17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 IFIH1Q9BYX4 1025 aaKnown RBP17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 SAMM50Q9Y512 469 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 TRPV2Q9Y5S1 764 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 NLRC5Q86WI3 1866 aa17.43■□□□□ 0.38
CCDC90B-215ENST00000529745 COL4A4P53420 1690 aaPredicted RBP17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 C22orf31O95567 290 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 OATP04181 439 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 CA3P07451 260 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 MYOGP15173 224 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 TRIM29Q14134 588 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 PPP2R2DQ66LE6 453 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 MIER3Q7Z3K6 550 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 LINC01465Q8N7H1 131 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 ZBTB10Q96DT7 871 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 RAD9AQ99638 391 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 C1QTNF1Q9BXJ1 281 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 VAV3Q9UKW4 847 aa17.42■□□□□ 0.38
CCDC90B-215ENST00000529745 REV3LO60673 3130 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 TCF20Q9UGU0 1960 aaKnown RBP17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 MAGEB2O15479 319 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 TLL1O43897 1013 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 CCNT1O60563 726 aaKnown RBP17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 AMHP03971 560 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 GHRP10912 638 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 HTRA4P83105 476 aaPredicted RBP17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 PRKCEQ02156 737 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 TARBP2Q15633 366 aaKnown RBP17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 UGCGQ16739 394 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.41■□□□□ 0.387e-9■■■■■ 34.2
CCDC90B-215ENST00000529745 CKAP2LQ8IYA6 745 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 KIAA0319LQ8IZA0 1049 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 ZNF710Q8N1W2 664 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 HAS1Q92839 578 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 GJA10Q969M2 543 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 TOP1MTQ969P6 601 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 TBC1D32Q96NH3 1257 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 CELF4Q9BZC1 486 aaKnown RBP17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 NRBP2Q9NSY0 501 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 CHD7Q9P2D1 2997 aa17.41■□□□□ 0.38
CCDC90B-215ENST00000529745 XIRP2A4UGR9 3374 aa17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 FAM205CA6NFA0 338 aa17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 M0QZ92 97 aa17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 ST18O60284 1047 aa17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 STBD1O95210 358 aa17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 POU3F3P20264 500 aaPredicted RBP17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 TAP1Q03518 808 aa17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 SLFN12Q8IYM2 578 aa17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 SP7Q8TDD2 431 aaPredicted RBP17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 NIFKQ9BYG3 293 aaKnown RBP17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 FAM49AQ9H0Q0 323 aaPredicted RBP17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 THEGQ9P2T0 379 aa17.4■□□□□ 0.38
CCDC90B-215ENST00000529745 CHMP2AO43633 222 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 SPIRE1Q08AE8 756 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 XKR3Q5GH77 459 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 FBXO18Q8NFZ0 1043 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 CEP89Q96ST8 783 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 GAS2L1Q99501 681 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 FTHL17Q9BXU8 183 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 PRDM12Q9H4Q4 367 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 AGO3Q9H9G7 860 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 INSL6Q9Y581 213 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 TRANK1O15050 2925 aa17.39■□□□□ 0.37
CCDC90B-215ENST00000529745 EML1O00423 815 aa17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 DKC1O60832 514 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 ARHGEF15O94989 841 aa17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 PSMC5P62195 406 aa17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 MRPS5P82675 430 aaKnown RBP17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 ORC2Q13416 577 aaPredicted RBP17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 C8orf76Q96K31 380 aa17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 ZBED2Q9BTP6 218 aa17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 FOXP1Q9H334 677 aaPredicted RBP17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 HCN4Q9Y3Q4 1203 aa17.38■□□□□ 0.37
CCDC90B-215ENST00000529745 IGKV6-21A0A0C4DH24 114 aa17.37■□□□□ 0.37
CCDC90B-215ENST00000529745 LCHNA4D1U4 455 aa17.37■□□□□ 0.37
CCDC90B-215ENST00000529745 BAG4O95429 457 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms