RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 GRK6P43250 576 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 FNTBP49356 437 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 PRIM2P49643 509 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 CNN3Q15417 329 aaKnown RBP4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 NFKBIBQ15653 356 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 PRR16Q569H4 304 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 PITRM1Q5JRX3 1037 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 DGKKQ5KSL6 1271 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 CCDC174Q6PII3 467 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 PAOXQ6QHF9 649 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 LDHAL6AQ6ZMR3 332 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 NME9Q86XW9 330 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 CLASRPQ8N2M8 674 aaKnown RBP4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 TMTC2Q8N394 836 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 OR2C3Q8N628 320 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 PIP4K2CQ8TBX8 421 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 CCT6BQ92526 530 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 LENG1Q96BZ8 264 aaPredicted RBP4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 MPP4Q96JB8 637 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 MYRFLQ96LU7 910 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 CDC5LQ99459 802 aaKnown RBP4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 WNT8AQ9H1J5 351 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 ARFGAP3Q9NP61 516 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 SLC6A20Q9NP91 592 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 BTG4Q9NY30 223 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 LRCH1Q9Y2L9 728 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 ATP23Q9Y6H3 246 aa4.33□□□□□ -1.72
AMBRA1-208ENST00000529558 PRSS38A1L453 326 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 CAPN8A6NHC0 703 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 GNAT3A8MTJ3 354 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 FAM155AB1AL88 458 aaPredicted RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 C22orf46C9J442 243 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 RNF225M0QZC1 329 aaPredicted RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 ELL2O00472 640 aaPredicted RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 FKTNO75072 461 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 HSD3B1P14060 373 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 EDNRBP24530 442 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 FPR2P25090 351 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 CHKAP35790 457 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 IL6STP40189 918 aaPredicted RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 SLC16A1P53985 500 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 DUSP4Q13115 394 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 SNX17Q15036 470 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 PUM3Q15397 648 aaKnown RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 GRIK4Q16099 956 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 MUM1Q2TAK8 710 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 GAB4Q2WGN9 574 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 SLC4A8Q2Y0W8 1093 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 CATSPEREQ5SY80 951 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 MBNL2Q5VZF2 373 aaKnown RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 ESPNLQ6ZVH7 1005 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 SYDE1Q6ZW31 735 aaPredicted RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 PHYKPLQ8IUZ5 450 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 FAM20CQ8IXL6 584 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 ARMC10Q8N2F6 343 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 NAT16Q8N8M0 369 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 UHMK1Q8TAS1 419 aaKnown RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 LRTOMTQ8WZ04 291 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 GATA6Q92908 595 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 PHKBQ93100 1093 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 CGRRF1Q99675 332 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 ISCA1Q9BUE6 129 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 VPS11Q9H270 941 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 SAGE1Q9NXZ1 904 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 MARCH2Q9P0N8 246 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 NRBP1Q9UHY1 535 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 TMPRSS11EQ9UL52 423 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 LIMCH1Q9UPQ0 1083 aa4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 COA3Q9Y2R0 106 aaPredicted RBP4.32□□□□□ -1.72
AMBRA1-208ENST00000529558 CFAP69A5D8W1 941 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 LRRC10BA6NIK2 292 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 HTRA2O43464 458 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 MGEA5O60502 916 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 BUB1BO60566 1050 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 LPLP06858 475 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 DDIT3P35638 169 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 PPM1AP35813 382 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 CASP2P42575 452 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 CEBPAP49715 358 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 CASP5P51878 434 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 EPHA5P54756 1037 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 ANO4Q32M45 955 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 PRRT3Q5FWE3 981 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 DACT2Q5SW24 774 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 HLA-DQA1Q5Y7H0 255 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 SWSAP1Q6NVH7 229 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 TLDC1Q6P9B6 456 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 CCDC62Q6P9F0 684 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 ZPBP2Q6X784 338 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 KCTD1Q719H9 257 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 MAEAQ7L5Y9 396 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 RIOX2Q8IUF8 465 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 PPHLN1Q8NEY8 458 aaKnown RBP4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 NLGN2Q8NFZ4 835 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 ZSCAN18Q8TBC5 510 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 PLEKHO2Q8TD55 490 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 WFDC12Q8WWY7 111 aa4.31□□□□□ -1.72
AMBRA1-208ENST00000529558 AUTS2Q8WXX7 1259 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms