RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 PIEZO1Q92508 2521 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 KIF5CO60282 957 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 PEX10O60683 326 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 PLA2G6O60733 806 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 KRT18P05783 430 aaKnown RBP13.01□□□□□ -0.33
USF1-208ENST00000528768 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
USF1-208ENST00000528768 IDEP14735 1019 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 CASP14P31944 242 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 CYP2C19P33261 490 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 ARHGAP4P98171 946 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 DPP9Q86TI2 863 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 SIAH1Q8IUQ4 282 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 REXO1L1PQ8IX06 675 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 TUBGCP2Q9BSJ2 902 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 BLOC1S4Q9NUP1 217 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 PNMA2Q9UL42 364 aa13.01□□□□□ -0.33
USF1-208ENST00000528768 LUC7L2Q9Y383 392 aaKnown RBP13.01□□□□□ -0.33
USF1-208ENST00000528768 MRPL11Q9Y3B7 192 aaKnown RBP13.01□□□□□ -0.33
USF1-208ENST00000528768 POTEMA6NI47 508 aa13□□□□□ -0.33
USF1-208ENST00000528768 MYMKA6NI61 221 aa13□□□□□ -0.33
USF1-208ENST00000528768 PIK3CDO00329 1044 aa13□□□□□ -0.33
USF1-208ENST00000528768 IPO7O95373 1038 aaKnown RBP13□□□□□ -0.33
USF1-208ENST00000528768 GNA14O95837 355 aa13□□□□□ -0.33
USF1-208ENST00000528768 CYP3A4P08684 503 aa13□□□□□ -0.33
USF1-208ENST00000528768 FECHP22830 423 aa13□□□□□ -0.33
USF1-208ENST00000528768 KRT9P35527 623 aa13□□□□□ -0.33
USF1-208ENST00000528768 SREBF1P36956 1147 aa13□□□□□ -0.33
USF1-208ENST00000528768 ADCYAP1R1P41586 468 aa13□□□□□ -0.33
USF1-208ENST00000528768 GNG11P61952 73 aa13□□□□□ -0.33
USF1-208ENST00000528768 TLE2Q04725 743 aa13□□□□□ -0.33
USF1-208ENST00000528768 TBC1D8BQ0IIM8 1120 aa13□□□□□ -0.33
USF1-208ENST00000528768 CENPPQ6IPU0 288 aa13□□□□□ -0.33
USF1-208ENST00000528768 USP17L6PQ6QN14 398 aa13□□□□□ -0.33
USF1-208ENST00000528768 MYOCDQ8IZQ8 938 aa13□□□□□ -0.33
USF1-208ENST00000528768 MNS1Q8NEH6 495 aa13□□□□□ -0.33
USF1-208ENST00000528768 TRPV1Q8NER1 839 aa13□□□□□ -0.33
USF1-208ENST00000528768 OR8K1Q8NGG5 319 aa13□□□□□ -0.33
USF1-208ENST00000528768 DDX12PQ92771 950 aa13□□□□□ -0.33
USF1-208ENST00000528768 HAS1Q92839 578 aa13□□□□□ -0.33
USF1-208ENST00000528768 PCMTD1Q96MG8 357 aaPredicted RBP13□□□□□ -0.33
USF1-208ENST00000528768 NOC4LQ9BVI4 516 aaKnown RBP13□□□□□ -0.33
USF1-208ENST00000528768 L2HGDHQ9H9P8 463 aa13□□□□□ -0.33
USF1-208ENST00000528768 KCNMB3Q9NPA1 279 aa13□□□□□ -0.33
USF1-208ENST00000528768 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
USF1-208ENST00000528768 ABHD10Q9NUJ1 306 aa13□□□□□ -0.33
USF1-208ENST00000528768 FEM1BQ9UK73 627 aa13□□□□□ -0.33
USF1-208ENST00000528768 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
USF1-208ENST00000528768 PRR12Q9ULL5 1215 aa13□□□□□ -0.33
USF1-208ENST00000528768 PHF24Q9UPV7 400 aa13□□□□□ -0.33
USF1-208ENST00000528768 TRIM49BA6NDI0 452 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
USF1-208ENST00000528768 MEIS2O14770 477 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 CNMDO75829 334 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 GYPCP04921 128 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 SSBP05455 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
USF1-208ENST00000528768 POLR2MP0CAP2 368 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 CIITAP33076 1130 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 TUBB4BP68371 445 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 GOLGA8FQ08AF8 430 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 GOLGA8DPQ0D2H9 430 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 STK4Q13043 487 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 LRRC41Q15345 812 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 AAK1Q2M2I8 961 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 USH1GQ495M9 461 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 ANKRD40Q6AI12 368 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 CATSPERGQ6ZRH7 1159 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 DYMQ7RTS9 669 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 NPLOC4Q8TAT6 608 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 ANKRD7Q92527 254 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 CNOT6LQ96LI5 555 aaKnown RBP12.99□□□□□ -0.33
USF1-208ENST00000528768 TOX2Q96NM4 488 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 DUSP9Q99956 384 aaKnown RBP12.99□□□□□ -0.33
USF1-208ENST00000528768 SLC39A2Q9NP94 309 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 PANK4Q9NVE7 773 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 MYO1AQ9UBC5 1043 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 DNM3Q9UQ16 869 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 SIPA1L1O43166 1804 aa12.99□□□□□ -0.33
USF1-208ENST00000528768 ZNF236Q9UL36 1845 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 URI1O94763 535 aaPredicted RBP12.98□□□□□ -0.33
USF1-208ENST00000528768 PLA2G4BP0C869 781 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 KRT83P78385 493 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 GLIPR1L2Q4G1C9 344 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 ARHGAP29Q52LW3 1261 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 PRR16Q569H4 304 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 FIGNQ5HY92 759 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 FAM26FQ5R3K3 315 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 RNF180Q86T96 592 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 TXLNBQ8N3L3 684 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 SHCBP1Q8NEM2 672 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 FEZ1Q99689 392 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 TMEM39AQ9NV64 488 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 CAPN11Q9UMQ6 739 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 KIAA1024Q9UPX6 916 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 ADGRG1Q9Y653 693 aa12.98□□□□□ -0.33
USF1-208ENST00000528768 A0A1W2PQJ5 194 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 DCDC2CA8MYV0 355 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 EDIL3O43854 480 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 COBLO75128 1261 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms