RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 MCPH1Q8NEM0 835 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 ENGASEQ8NFI3 743 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 AFG1LQ8WV93 481 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 FOXD4L4Q8WXT5 416 aaPredicted RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 LARP4BQ92615 738 aaKnown RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 GLG1Q92896 1179 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 SYAP1Q96A49 352 aaPredicted RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 TOX2Q96NM4 488 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 LXNQ9BS40 222 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 MMTAG2Q9BU76 263 aaKnown RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 LMBRD1Q9NUN5 540 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 KBTBD4Q9NVX7 518 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 ODF2LQ9ULJ1 636 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 MYH9P35579 1960 aaKnown RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 ZSWIM8A7E2V4 1837 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 IGKV6-21A0A0C4DH24 114 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 PVALEFA0A1B0GWK0 134 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 MBLAC1A4D2B0 266 aaPredicted RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 H0YCG3 227 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 EML1O00423 815 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 ADCY6O43306 1168 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 PRPF40AO75400 957 aaKnown RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 MAFO75444 373 aaPredicted RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 ZNF202O95125 648 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 ASGR1P07306 291 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 MAPTP10636 758 aaKnown RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 PFKFB1P16118 471 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 TMOD1P28289 359 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 PPP1R2P41236 205 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 STAT6P42226 847 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 RARRES1P49788 294 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 DNM2P50570 870 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 ACLYP53396 1101 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 PSMD2Q13200 908 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 E2F4Q16254 413 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 KLHL40Q2TBA0 621 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 CT47A1Q5JQC4 288 aaPredicted RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 VARS2Q5ST30 1063 aaKnown RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 TAF2Q6P1X5 1199 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 CCDC60Q8IWA6 550 aaPredicted RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 TPH2Q8IWU9 490 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 FMR1NBQ8N0W7 255 aaPredicted RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 RASSF8Q8NHQ8 419 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 SH3TC2Q8TF17 1288 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 U2AF1L4Q8WU68 220 aaKnown RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 TCP11Q8WWU5 503 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 SLC7A3Q8WY07 619 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 KIFAP3Q92845 792 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 CCDC47Q96A33 483 aaKnown RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 EPSTI1Q96J88 318 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 FTOQ9C0B1 505 aaKnown RBP eCLIP6.93□□□□□ -1.3
MACF1-228ENST00000528611 MCOLN1Q9GZU1 580 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 UNC93B1Q9H1C4 597 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 DHX33Q9H6R0 707 aaKnown RBP6.93□□□□□ -1.3
MACF1-228ENST00000528611 GABBR1Q9UBS5 961 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 SEL1LQ9UBV2 794 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 KIAA1024Q9UPX6 916 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 SQORQ9Y6N5 450 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 HTTP42858 3142 aa6.93□□□□□ -1.3
MACF1-228ENST00000528611 SCN10AQ9Y5Y9 1956 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 A0A0U1RQG5 324 aaPredicted RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 SMIM35A0A1B0GVV1 85 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 POLR2DO15514 142 aaKnown RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 KINO60870 393 aaKnown RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 MED24O75448 989 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 STBD1O95210 358 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 KIF20AO95235 890 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 COL6A1P12109 1028 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 CYP11B2P19099 503 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 ADAM17P78536 824 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 PRKCEQ02156 737 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 RBL2Q08999 1139 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 TRIM32Q13049 653 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 GRB10Q13322 594 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 SNW1Q13573 536 aaKnown RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 ALCAMQ13740 583 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 MXD4Q14582 209 aaPredicted RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 MFSD10Q14728 455 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 SNX17Q15036 470 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 PLCB4Q15147 1175 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 PPP2R5AQ15172 486 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 KCNA10Q16322 511 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 FOXD4L6Q3SYB3 417 aaPredicted RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 NT5DC1Q5TFE4 455 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 IER5Q5VY09 327 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 FOXR2Q6PJQ5 311 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 FOXD4L3Q6VB84 417 aaPredicted RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 KRBA2Q6ZNG9 492 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 ANO5Q75V66 913 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 SH3RF1Q7Z6J0 888 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 TRIML1Q8N9V2 468 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 FSIP1Q8NA03 581 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 CNNM3Q8NE01 707 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 SPATA20Q8TB22 786 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 RAD54LQ92698 747 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 KAT2BQ92831 832 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 COPS5Q92905 334 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 DYDC2Q96IM9 177 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 DRC1Q96MC2 740 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 CCDC43Q96MW1 224 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms