RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SEPT9Q9UHD8 586 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ZNF215Q9UL58 517 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 LAMA3Q16787 3333 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PLA2G4BP0C869 781 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 RARRES1P49788 294 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PSEN2P49810 448 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ACLYP53396 1101 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 DHX8Q14562 1220 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MFSD10Q14728 455 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KIAA0753Q2KHM9 967 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 GRAMD1CQ8IYS0 662 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 BBXQ8WY36 941 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 LARP4BQ92615 738 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 STAMQ92783 540 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 FAM167AQ96KS9 214 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 NIFKQ9BYG3 293 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CUEDC2Q9H467 287 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 NRBP2Q9NSY0 501 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 USP25Q9UHP3 1055 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 DBR1Q9UK59 544 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ZBTB42B2RXF5 422 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KINO60870 393 aaKnown RBP13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SSBP05455 408 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SLC12A3P55017 1021 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CHMP4BP1P59074 171 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TARBP2Q15633 366 aaKnown RBP13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CEP57L1Q8IYX8 460 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SYT2Q8N9I0 419 aaPredicted RBP13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PAGE5Q96GU1 130 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CEP89Q96ST8 783 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CYP26B1Q9NR63 512 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KBTBD4Q9NVX7 518 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TRPC6Q9Y210 931 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ALPK3Q96L96 1907 aa13.55□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 DNM1LO00429 736 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 HBP1O60381 514 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 INSRRP14616 1297 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MTERF2Q49AM1 385 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SV2BQ7L1I2 683 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SH3RF1Q7Z6J0 888 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TRAPPC12Q8WVT3 735 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PAWRQ96IZ0 340 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CEP170P1Q96L14 293 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PHF24Q9UPV7 400 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 LAMA2P24043 3122 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 GRIN2DO15399 1336 aa13.54□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ARHGEF35A5YM69 484 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MOXD2PA6NHM9 499 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KBTBD13C9JR72 458 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CASP1P29466 404 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 AFMP43652 599 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MDM2Q00987 491 aaPredicted RBP13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ARSHQ5FYA8 562 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PADI6Q6TGC4 694 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 RUSC1Q9BVN2 902 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KATNAL1Q9BW62 490 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MAGEF1Q9HAY2 307 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SCN10AQ9Y5Y9 1956 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PDE4DIPQ5VU43 2346 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 A0A1W2PQ45 241 aaPredicted RBP13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 A0A1W2PQY0 241 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MYMKA6NI61 221 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CABYRO75952 493 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 COL6A1P12109 1028 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CYP11B2P19099 503 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PPFIA1Q13136 1202 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 HIC1Q14526 733 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KLHL40Q2TBA0 621 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ZNF484Q5JVG2 852 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 RINT1Q6NUQ1 792 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 C1orf186Q6ZWK4 172 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ZBTB10Q96DT7 871 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CCDC43Q96MW1 224 aaKnown RBP13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TNMDQ9H2S6 317 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CLSTN2Q9H4D0 955 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SETD4Q9NVD3 440 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 HDAC6Q9UBN7 1215 aa13.53□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ARID2Q68CP9 1835 aa13.52□□□□□ -0.24
TRAF3IP2-211ENST00000528599 NPHP3-ACAD11A0A0J9YXS1 232 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 USO1O60763 962 aaKnown RBP13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 IGBP1P78318 339 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CUL4BQ13620 913 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GRIK4Q16099 956 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CAMK4Q16566 473 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ANKLE1Q8NAG6 615 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GLT1D1Q96MS3 346 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms