RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ST6GALNAC4Q9H4F1 302 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 EFCAB8A8MWE9 144 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 LCA5LO95447 670 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 NF2P35240 595 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 PSMC2P35998 433 aaKnown RBP16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 KLK7P49862 253 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 DGKZQ13574 1117 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 TMEM132BQ14DG7 1078 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 GNPTABQ3T906 1256 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 ZNF569Q5MCW4 686 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 PDXDC1Q6P996 788 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 OTUD6AQ7L8S5 288 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 PDCL2Q8N4E4 241 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 BANK1Q8NDB2 785 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 ZC3H15Q8WU90 426 aaKnown RBP16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 BAP1Q92560 729 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 DRC1Q96MC2 740 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 CCDC43Q96MW1 224 aaKnown RBP16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 WDR24Q96S15 920 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 STRA6Q9BX79 667 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 MOV10L1Q9BXT6 1211 aaKnown RBP16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 GBP3Q9H0R5 595 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 LUC7LQ9NQ29 371 aaKnown RBP16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 FAM207AQ9NSI2 230 aaPredicted RBP16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 FBXL5Q9UKA1 691 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 PCDHA10Q9Y5I2 948 aa16.23■□□□□ 0.19
ECHDC1-220ENST00000528402 SSC5DA1L4H1 1573 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 SPDYE16A6NNV3 312 aaPredicted RBP16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 DDX39AO00148 427 aaKnown RBP16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 CXCL11O14625 94 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 HIP1RO75146 1068 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 ABCD1P33897 745 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 ARHGAP25P42331 645 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 RARRES1P49788 294 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 PPATQ06203 517 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 NCBP1Q09161 790 aaKnown RBP16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 DPY19L2Q6NUT2 758 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 RRAGAQ7L523 313 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 KIAA1328Q86T90 577 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 FMNL3Q8IVF7 1028 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 PROCA1Q8NCQ7 364 aaPredicted RBP16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 ATP6V0A1Q93050 837 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 FIZ1Q96SL8 496 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 CYP39A1Q9NYL5 469 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 WRAP73Q9P2S5 460 aaPredicted RBP16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 FRMD4BQ9Y2L6 1034 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 RIPK3Q9Y572 518 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 MRFAP1Q9Y605 127 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 BZW2Q9Y6E2 419 aaKnown RBP16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 SNCAIPQ9Y6H5 919 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 ASTN1O14525 1302 aa16.22■□□□□ 0.19
ECHDC1-220ENST00000528402 TESPA1A2RU30 521 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 TGFB1I1O43294 461 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 DDNO94850 711 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 PLS3P13797 630 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 YWHABP31946 246 aaKnown RBP16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 COPB2P35606 906 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 KIF5AQ12840 1032 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 PPP2R5AQ15172 486 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 SLC9C1Q4G0N8 1177 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 SFMBT2Q5VUG0 894 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 USP50Q70EL3 339 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 C12orf56Q8IXR9 622 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 CEP112Q8N8E3 955 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 HVCN1Q96D96 273 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 ZFP91Q96JP5 570 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 NAPGQ99747 312 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 FHDC1Q9C0D6 1143 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 DEF6Q9H4E7 631 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 C17orf75Q9HAS0 396 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 DMAC2Q9NW81 257 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 RNF181Q9P0P0 153 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 PFASO15067 1338 aa16.21■□□□□ 0.19
ECHDC1-220ENST00000528402 SFI1A8K8P3 1242 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 ZBTB39O15060 712 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 PPP1R37O75864 691 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 AKAP3O75969 853 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 SERPING1P05155 500 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 PSAPP07602 524 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 SCP2P22307 547 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 ANXA13P27216 316 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 NMT1P30419 496 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 VAV2P52735 878 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 RBM10P98175 930 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 MAPK7Q13164 816 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 VGLL4Q14135 290 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 CCDC122Q5T0U0 273 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 LBX2Q6XYB7 198 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 GBP6Q6ZN66 633 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 UBXN4Q92575 508 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 JAKMIP2Q96AA8 810 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 ACCSQ96QU6 501 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 LSM14BQ9BX40 385 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 AIPL1Q9NZN9 384 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 CDC23Q9UJX2 597 aa16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 REXO2Q9Y3B8 237 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-220ENST00000528402 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms