RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 GJA10Q969M2 543 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 ZBTB10Q96DT7 871 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 RAD9AQ99638 391 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 CELF4Q9BZC1 486 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 TRPV2Q9Y5S1 764 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 CHMP2AO43633 222 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 ZNF862O60290 1169 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 C22orf31O95567 290 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 OATP04181 439 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 CA3P07451 260 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 GHRP10912 638 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 FOSL2P15408 326 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 SAFBQ15424 915 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 KIAA0319LQ8IZA0 1049 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 HAS1Q92839 578 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 TOP1MTQ969P6 601 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 GAS2L1Q99501 681 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 NIFKQ9BYG3 293 aaKnown RBP13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 INSL6Q9Y581 213 aa13.64□□□□□ -0.23
TRAPPC4-209ENST00000528230 TTC3P53804 2025 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 MARCH6O60337 910 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 DKC1O60832 514 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 PRKCEQ02156 737 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 TAP1Q03518 808 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 XKR3Q5GH77 459 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 C8orf76Q96K31 380 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 FTHL17Q9BXU8 183 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 PRDM12Q9H4Q4 367 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 VAV3Q9UKW4 847 aa13.63□□□□□ -0.23
TRAPPC4-209ENST00000528230 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 ENPP3O14638 875 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 STBD1O95210 358 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 TMOD1P28289 359 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 MCM2P49736 904 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 PSMC5P62195 406 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 HTRA4P83105 476 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 TMEM62Q0P6H9 643 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 TARBP2Q15633 366 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 UGCGQ16739 394 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 ODR4Q5SWX8 454 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 TRMT1LQ7Z2T5 733 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 MYOCDQ8IZQ8 938 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 LINC01465Q8N7H1 131 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 FAM184AQ8NB25 1140 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 FBXO18Q8NFZ0 1043 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 MAFAQ8NHW3 353 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 TBC1D32Q96NH3 1257 aa13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 FOXP1Q9H334 677 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 AGO3Q9H9G7 860 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-209ENST00000528230 EML1O00423 815 aa13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 P4HBP07237 508 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 POU3F3P20264 500 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 QARSP47897 775 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 CRYBB1P53674 252 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 EPHA7Q15375 998 aa13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 EFCAB12Q6NXP0 572 aa13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 TMCO2Q7Z6W1 182 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 METTL13Q8N6R0 699 aa13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 PADI3Q9ULW8 664 aa13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
TRAPPC4-209ENST00000528230 GPR32O75388 356 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 CD52P31358 61 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 FOSBP53539 338 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 ERVK-21P61565 698 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 CDC42EP1Q00587 391 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 SPIRE1Q08AE8 756 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 TBC1D8BQ0IIM8 1120 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 PAK2Q13177 524 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 ORC2Q13416 577 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 CALCRLQ16602 461 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 SLC17A8Q8NDX2 589 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 CEP89Q96ST8 783 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 MAP7D2Q96T17 732 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 KIF3AQ9Y496 699 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
TRAPPC4-209ENST00000528230 IGKV6-21A0A0C4DH24 114 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 LCHNA4D1U4 455 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 LINC01553A4QN01 128 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 GPR182O15218 404 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 NEMFO60524 1076 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 RPS6KA5O75582 802 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 ARHGEF15O94989 841 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 ADGRE1Q14246 886 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 RTN4RL1Q86UN2 441 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 C4orf19Q8IY42 314 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 EXOC8Q8IYI6 725 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 BANK1Q8NDB2 785 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 TMX3Q96JJ7 454 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 TGS1Q96RS0 853 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms