RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SP7Q8TDD2 431 aaPredicted RBP37.26■■■■□ 3.56
SSSCA1-205ENST00000527920 GJA10Q969M2 543 aa37.26■■■■□ 3.56
SSSCA1-205ENST00000527920 NRBP2Q9NSY0 501 aa37.26■■■■□ 3.56
SSSCA1-205ENST00000527920 MYH9P35579 1960 aaKnown RBP37.26■■■■□ 3.55
SSSCA1-205ENST00000527920 TBX3O15119 743 aa37.25■■■■□ 3.55
SSSCA1-205ENST00000527920 MAGEB2O15479 319 aa37.25■■■■□ 3.55
SSSCA1-205ENST00000527920 MMP1P03956 469 aa37.25■■■■□ 3.55
SSSCA1-205ENST00000527920 PRKCEQ02156 737 aa37.25■■■■□ 3.55
SSSCA1-205ENST00000527920 MIER3Q7Z3K6 550 aa37.25■■■■□ 3.55
SSSCA1-205ENST00000527920 LLPHQ9BRT6 129 aaKnown RBP37.25■■■■□ 3.55
SSSCA1-205ENST00000527920 AGO3Q9H9G7 860 aaKnown RBP37.25■■■■□ 3.55
SSSCA1-205ENST00000527920 FAM117BQ6P1L5 589 aa37.24■■■■□ 3.55
SSSCA1-205ENST00000527920 ZSCAN31Q96LW9 406 aaPredicted RBP37.24■■■■□ 3.55
SSSCA1-205ENST00000527920 FTHL17Q9BXU8 183 aa37.24■■■■□ 3.55
SSSCA1-205ENST00000527920 COL4A6Q14031 1691 aa37.24■■■■□ 3.55
SSSCA1-205ENST00000527920 IGFBP4P22692 258 aa37.23■■■■□ 3.55
SSSCA1-205ENST00000527920 TMEM62Q0P6H9 643 aa37.23■■■■□ 3.55
SSSCA1-205ENST00000527920 NR5A1Q13285 461 aa37.23■■■■□ 3.55
SSSCA1-205ENST00000527920 TRIM29Q14134 588 aa37.23■■■■□ 3.55
SSSCA1-205ENST00000527920 UGCGQ16739 394 aa37.23■■■■□ 3.55
SSSCA1-205ENST00000527920 ARNTL2Q8WYA1 636 aa37.23■■■■□ 3.55
SSSCA1-205ENST00000527920 SH2B1Q9NRF2 756 aaPredicted RBP37.23■■■■□ 3.55
SSSCA1-205ENST00000527920 LINC01553A4QN01 128 aa37.22■■■■□ 3.55
SSSCA1-205ENST00000527920 CCNT1O60563 726 aaKnown RBP37.22■■■■□ 3.55
SSSCA1-205ENST00000527920 CD52P31358 61 aa37.22■■■■□ 3.55
SSSCA1-205ENST00000527920 ERVK-21P61565 698 aa37.22■■■■□ 3.55
SSSCA1-205ENST00000527920 PPP2R5CQ13362 524 aa37.22■■■■□ 3.55
SSSCA1-205ENST00000527920 EARS2Q5JPH6 523 aaKnown RBP37.22■■■■□ 3.55
SSSCA1-205ENST00000527920 TGS1Q96RS0 853 aaKnown RBP37.22■■■■□ 3.55
SSSCA1-205ENST00000527920 EPOPA6NHQ4 379 aa37.21■■■■□ 3.55
SSSCA1-205ENST00000527920 ZNF710Q8N1W2 664 aa37.21■■■■□ 3.55
SSSCA1-205ENST00000527920 IL27Q8NEV9 243 aa37.21■■■■□ 3.55
SSSCA1-205ENST00000527920 CERS4Q9HA82 394 aa37.21■■■■□ 3.55
SSSCA1-205ENST00000527920 VAV3Q9UKW4 847 aa37.21■■■■□ 3.55
SSSCA1-205ENST00000527920 UNC80Q8N2C7 3258 aa37.2■■■■□ 3.55
SSSCA1-205ENST00000527920 A0A0C4DFX4 3053 aa37.2■■■■□ 3.55
SSSCA1-205ENST00000527920 KRT40Q6A162 431 aa37.2■■■■□ 3.55
SSSCA1-205ENST00000527920 YME1L1Q96TA2 773 aa37.2■■■■□ 3.55
SSSCA1-205ENST00000527920 PADI3Q9ULW8 664 aa37.2■■■■□ 3.55
SSSCA1-205ENST00000527920 PRUNE2Q8WUY3 3088 aa37.2■■■■□ 3.55
SSSCA1-205ENST00000527920 ENPP3O14638 875 aa37.19■■■■□ 3.54
SSSCA1-205ENST00000527920 PAK2Q13177 524 aa37.19■■■■□ 3.54
SSSCA1-205ENST00000527920 XKR3Q5GH77 459 aa37.19■■■■□ 3.54
SSSCA1-205ENST00000527920 TRMT1LQ7Z2T5 733 aaKnown RBP37.19■■■■□ 3.54
SSSCA1-205ENST00000527920 CCDC83Q8IWF9 413 aa37.19■■■■□ 3.54
SSSCA1-205ENST00000527920 DIS3L2Q8IYB7 885 aaKnown RBP37.19■■■■□ 3.54
SSSCA1-205ENST00000527920 LINC01465Q8N7H1 131 aa37.19■■■■□ 3.54
SSSCA1-205ENST00000527920 TRANK1O15050 2925 aa37.18■■■■□ 3.54
SSSCA1-205ENST00000527920 SPRED2Q7Z698 418 aa37.18■■■■□ 3.54
SSSCA1-205ENST00000527920 METTL13Q8N6R0 699 aa37.18■■■■□ 3.54
SSSCA1-205ENST00000527920 HAS1Q92839 578 aa37.18■■■■□ 3.54
SSSCA1-205ENST00000527920 NIFKQ9BYG3 293 aaKnown RBP37.18■■■■□ 3.54
SSSCA1-205ENST00000527920 WDR81Q562E7 1941 aa37.17■■■■□ 3.54
SSSCA1-205ENST00000527920 BTBD18B2RXH4 712 aa37.17■■■■□ 3.54
SSSCA1-205ENST00000527920 GTPBP6O43824 516 aaPredicted RBP37.17■■■■□ 3.54
SSSCA1-205ENST00000527920 TMOD1P28289 359 aa37.17■■■■□ 3.54
SSSCA1-205ENST00000527920 TARBP2Q15633 366 aaKnown RBP37.17■■■■□ 3.54
SSSCA1-205ENST00000527920 ODR4Q5SWX8 454 aa37.17■■■■□ 3.54
SSSCA1-205ENST00000527920 FAM205CA6NFA0 338 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 RFXAPO00287 272 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 UPP2O95045 317 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 CRYBB1P53674 252 aaPredicted RBP37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 HMGN5P82970 282 aaKnown RBP37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 RABEP1Q15276 862 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 SLFN12Q8IYM2 578 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 LINC01599Q8WXQ3 324 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 SAMD11Q96NU1 681 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 MAP7D2Q96T17 732 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 TSPYL2Q9H2G4 693 aaPredicted RBP37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 MTCH2Q9Y6C9 303 aa37.16■■■■□ 3.54
SSSCA1-205ENST00000527920 STBD1O95210 358 aa37.15■■■■□ 3.54
SSSCA1-205ENST00000527920 PSMC5P62195 406 aa37.15■■■■□ 3.54
SSSCA1-205ENST00000527920 POTEDQ86YR6 584 aa37.15■■■■□ 3.54
SSSCA1-205ENST00000527920 GPR32O75388 356 aa37.14■■■■□ 3.54
SSSCA1-205ENST00000527920 CLCN3P51790 818 aa37.14■■■■□ 3.54
SSSCA1-205ENST00000527920 GRB10Q13322 594 aa37.14■■■■□ 3.54
SSSCA1-205ENST00000527920 EFCAB12Q6NXP0 572 aa37.14■■■■□ 3.54
SSSCA1-205ENST00000527920 UPF2Q9HAU5 1272 aaKnown RBP37.14■■■■□ 3.54
SSSCA1-205ENST00000527920 ERVK-5Q9HDB9 667 aa37.14■■■■□ 3.54
SSSCA1-205ENST00000527920 LMCD1Q9NZU5 365 aa37.14■■■■□ 3.54
SSSCA1-205ENST00000527920 GINS2Q9Y248 185 aa37.14■■■■□ 3.54
SSSCA1-205ENST00000527920 EML1O00423 815 aa37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 LPXNO60711 386 aa37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 DKC1O60832 514 aaKnown RBP eCLIP37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 RPS6KA5O75582 802 aa37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 TBC1D8BQ0IIM8 1120 aa37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 SAFBQ15424 915 aaKnown RBP eCLIP37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 KIZQ2M2Z5 673 aa37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 TMEM40Q8WWA1 233 aa37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 CDHR5Q9HBB8 845 aa37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 RC3H2Q9HBD1 1191 aaKnown RBP37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 TTC3P53804 2025 aa37.13■■■■□ 3.53
SSSCA1-205ENST00000527920 MARCH6O60337 910 aa37.12■■■■□ 3.53
SSSCA1-205ENST00000527920 BAG4O95429 457 aaKnown RBP37.12■■■■□ 3.53
SSSCA1-205ENST00000527920 VTNP04004 478 aa37.12■■■■□ 3.53
SSSCA1-205ENST00000527920 QARSP47897 775 aaKnown RBP37.12■■■■□ 3.53
SSSCA1-205ENST00000527920 RTN4RL1Q86UN2 441 aaPredicted RBP37.12■■■■□ 3.53
SSSCA1-205ENST00000527920 CRIPAKQ8N1N5 446 aa37.12■■■■□ 3.53
SSSCA1-205ENST00000527920 CEP89Q96ST8 783 aa37.12■■■■□ 3.53
SSSCA1-205ENST00000527920 TMX1Q9H3N1 280 aa37.12■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms