RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MAP3K20Q9NYL2 800 aaKnown RBP16.38■□□□□ 0.21
USP47-207ENST00000527733 GFPT2O94808 682 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 TAAR1Q96RJ0 339 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 KCNH7Q9NS40 1196 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 GTF2A2P52657 109 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 MOXD1Q6UVY6 613 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 TERF1P54274 439 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 DPYDQ12882 1025 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 SAMD3Q8N6K7 520 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 NACA2Q9H009 215 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 ZFYVE28Q9HCC9 887 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 TUBE1Q9UJT0 475 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 WHAMMP3Q1A5X7 153 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 RHPN2Q8IUC4 686 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 KLHL7Q8IXQ5 586 aa16.37■□□□□ 0.21
USP47-207ENST00000527733 SMAP1Q8IYB5 467 aaPredicted RBP16.37■□□□□ 0.21
USP47-207ENST00000527733 UTP11Q9Y3A2 253 aaKnown RBP16.37■□□□□ 0.21
USP47-207ENST00000527733 KCNK3O14649 394 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 KRT222Q8N1A0 295 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 KCND2Q9NZV8 630 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 MFAP3LO75121 409 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 RHOBTB3O94955 611 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 MYCP01106 439 aaPredicted RBP16.36■□□□□ 0.21
USP47-207ENST00000527733 SERPING1P05155 500 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 ATP2A2P16615 1042 aaKnown RBP16.36■□□□□ 0.21
USP47-207ENST00000527733 MAP2K1Q02750 393 aaPredicted RBP16.36■□□□□ 0.21
USP47-207ENST00000527733 KCNH2Q12809 1159 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 MYO1EQ12965 1108 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 FEZ2Q9UHY8 353 aaPredicted RBP16.36■□□□□ 0.21
USP47-207ENST00000527733 AK9Q5TCS8 1911 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
USP47-207ENST00000527733 EIF4A3P38919 411 aaKnown RBP16.36■□□□□ 0.21
USP47-207ENST00000527733 GRIN1Q05586 938 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 HADHQ16836 314 aaKnown RBP16.36■□□□□ 0.21
USP47-207ENST00000527733 TEX2Q8IWB9 1127 aa16.36■□□□□ 0.21
USP47-207ENST00000527733 GBA2Q9HCG7 927 aaPredicted RBP16.36■□□□□ 0.21
USP47-207ENST00000527733 THAP12O43422 761 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 TNFAIP2Q03169 654 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 CFAP58Q5T655 872 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 SCFD2Q8WU76 684 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 TRIM11Q96F44 468 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 STMN4Q9H169 189 aaPredicted RBP16.35■□□□□ 0.21
USP47-207ENST00000527733 ATRNO75882 1429 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 MYMKA6NI61 221 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 MYO1FO00160 1098 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 STAM2O75886 525 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 SREBF1P36956 1147 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 ZNF568Q3ZCX4 644 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 PPP1R2P3Q6NXS1 205 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 C7orf31Q8N865 590 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 GPRASP2Q96D09 838 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 STIM2Q9P246 746 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 PDXKO00764 312 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 GPR161Q8N6U8 529 aaKnown RBP16.35■□□□□ 0.21
USP47-207ENST00000527733 ENGASEQ8NFI3 743 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.35■□□□□ 0.21
USP47-207ENST00000527733 PPP1R13BQ96KQ4 1090 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 TSNARE1Q96NA8 513 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 FAM217BQ9NTX9 383 aaPredicted RBP16.35■□□□□ 0.21
USP47-207ENST00000527733 A0A1W2PRG0 241 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 CAPN9O14815 690 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 SLC37A4O43826 429 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 TOB1P50616 345 aaPredicted RBP16.35■□□□□ 0.21
USP47-207ENST00000527733 LONRF2Q1L5Z9 754 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 CCDC105Q8IYK2 499 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 FAM213AQ9BRX8 229 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 TOPORSQ9NS56 1045 aaPredicted RBP16.35■□□□□ 0.21
USP47-207ENST00000527733 ASIC3Q9UHC3 531 aa16.35■□□□□ 0.21
USP47-207ENST00000527733 MSH4O15457 936 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 RNF8O76064 485 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 ST3GAL1Q11201 340 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 ADSSL1Q8N142 457 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 MOV10L1Q9BXT6 1211 aaKnown RBP16.34■□□□□ 0.21
USP47-207ENST00000527733 SMARCAD1Q9H4L7 1026 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 NHEJ1Q9H9Q4 299 aaPredicted RBP16.34■□□□□ 0.21
USP47-207ENST00000527733 GOLGA6L7A0A1B0GV03 622 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 LPXNO60711 386 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
USP47-207ENST00000527733 NDUFA10O95299 355 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 NMT1P30419 496 aaKnown RBP16.34■□□□□ 0.21
USP47-207ENST00000527733 GCLMP48507 274 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 MYRIPQ8NFW9 859 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 SH2D3AQ9BRG2 576 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 MRPL4Q9BYD3 311 aaKnown RBP16.34■□□□□ 0.21
USP47-207ENST00000527733 SNX25Q9H3E2 840 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 GPRC5DQ9NZD1 345 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 SYNPO2Q9UMS6 1093 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 EFNA5P52803 228 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 CEP128Q6ZU80 1094 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 DHX40Q8IX18 779 aaKnown RBP16.34■□□□□ 0.21
USP47-207ENST00000527733 OR6J1Q8NGC5 347 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 REEP2Q9BRK0 252 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 TRIM31Q9BZY9 425 aa16.34■□□□□ 0.21
USP47-207ENST00000527733 SOWAHDA6NJG2 315 aa16.33■□□□□ 0.21
USP47-207ENST00000527733 GH1P01241 217 aa16.33■□□□□ 0.21
USP47-207ENST00000527733 PPP2R5EQ16537 467 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms