RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 LCA5Q86VQ0 697 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 LMNTD2Q8IXW0 634 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 ADSSL1Q8N142 457 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 OXER1Q8TDS5 423 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 UBLCP1Q8WVY7 318 aaPredicted RBP8.12□□□□□ -1.11
SOX6-208ENST00000527619 ZMAT2Q96NC0 199 aaKnown RBP8.12□□□□□ -1.11
SOX6-208ENST00000527619 TUBGCP2Q9BSJ2 902 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 UBAC1Q9BSL1 405 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 PUS7LQ9H0K6 701 aaKnown RBP8.12□□□□□ -1.11
SOX6-208ENST00000527619 SYNCQ9H7C4 482 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 ECT2Q9H8V3 914 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 GALNT8Q9NY28 637 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 TMED5Q9Y3A6 229 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 SLC12A7Q9Y666 1083 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 GMEB1Q9Y692 573 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 NID2Q14112 1375 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 GPR75-ASB3A0A0A6YYF3 556 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 DCDC2CA8MYV0 355 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 B4E1Z4 1266 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 IGF2BP3O00425 579 aaKnown RBP eCLIP8.12□□□□□ -1.11
SOX6-208ENST00000527619 GPAA1O43292 621 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 ATP9BO43861 1147 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 GFPT2O94808 682 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 MAGEA1P43355 309 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 LACTBP83111 547 aaPredicted RBP8.12□□□□□ -1.11
SOX6-208ENST00000527619 ATP11AP98196 1134 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 FKBP4Q02790 459 aaKnown RBP eCLIP8.12□□□□□ -1.11
SOX6-208ENST00000527619 LBRQ14739 615 aaKnown RBP8.12□□□□□ -1.11
SOX6-208ENST00000527619 ARHGEF6Q15052 776 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 KRT71Q3SY84 523 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 PPP1R15BQ5SWA1 713 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 C10orf62Q5T681 223 aaPredicted RBP8.12□□□□□ -1.11
SOX6-208ENST00000527619 MPRIPQ6WCQ1 1025 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 ATG9AQ7Z3C6 839 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 SLC15A3Q8IY34 581 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 TLCD1Q96CP7 247 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 TRIM47Q96LD4 638 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
SOX6-208ENST00000527619 ARHGAP20Q9P2F6 1191 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 WDR35Q9P2L0 1181 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 PLAGL2Q9UPG8 496 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 ASB3Q9Y575 518 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 MYH7BA7E2Y1 1941 aa8.12□□□□□ -1.11
SOX6-208ENST00000527619 AKR1B10O60218 316 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 FLOT1O75955 427 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 WFS1O76024 890 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 EIF4A3P38919 411 aaKnown RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 LIFRP42702 1097 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 BRINP3Q76B58 766 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 MDM1Q8TC05 714 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 MTMR8Q96EF0 704 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 DHX36Q9H2U1 1008 aaKnown RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 VRTNQ9H8Y1 702 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 ABCF3Q9NUQ8 709 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 ADAM22Q9P0K1 906 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 SALL4Q9UJQ4 1053 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 FBXL5Q9UKA1 691 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 C2CD2Q9Y426 696 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 SPDYE5A6NIY4 337 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 A8MUI8 341 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 RNMTO43148 476 aaKnown RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 BUB1O43683 1085 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 IL15P40933 162 aaPredicted RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 PMS1P54277 932 aaKnown RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 PHEXP78562 749 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 SGSM1Q2NKQ1 1148 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 CMPK2Q5EBM0 449 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 MEX3CQ5U5Q3 659 aaKnown RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 NUGGCQ68CJ6 796 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 ANO7Q6IWH7 933 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 ZNF530Q6P9A1 599 aaPredicted RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 C2CD5Q86YS7 1000 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 KLHL7Q8IXQ5 586 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 LRRC34Q8IZ02 419 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 DCLK2Q8N568 766 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 CNBD1Q8NA66 436 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 LPIN2Q92539 896 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 IFT74Q96LB3 600 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 NSRP1Q9H0G5 558 aaKnown RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 RAB17Q9H0T7 212 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 TMCC3Q9ULS5 477 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 TMA7Q9Y2S6 64 aaKnown RBP8.11□□□□□ -1.11
SOX6-208ENST00000527619 GJA3Q9Y6H8 435 aa8.11□□□□□ -1.11
SOX6-208ENST00000527619 C1orf167Q5SNV9 1468 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 PXDNQ92626 1479 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 EIF4E1BA6NMX2 242 aaKnown RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 SART1O43290 800 aaKnown RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 HIP1RO75146 1068 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 UBOX5O94941 541 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 KRT16P08779 473 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 CHN1P15882 459 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 TCF7P36402 384 aaPredicted RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 MSH2P43246 934 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 OXCT1P55809 520 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 NLRP6P59044 892 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 TTLL12Q14166 644 aaPredicted RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 RTN1Q16799 776 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 GALNTL6Q49A17 601 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms