RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 CLIC6Q96NY7 704 aa18.63■□□□□ 0.57
SMCO4-204ENST00000527149 CSRNP2Q9H175 543 aa18.63■□□□□ 0.57
SMCO4-204ENST00000527149 ATP6V1DQ9Y5K8 247 aa18.63■□□□□ 0.57
SMCO4-204ENST00000527149 GNAT1P11488 350 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 CCT6AP40227 531 aaKnown RBP18.62■□□□□ 0.57
SMCO4-204ENST00000527149 NPEPPSP55786 919 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 AXDND1Q5T1B0 1012 aaPredicted RBP18.62■□□□□ 0.57
SMCO4-204ENST00000527149 USP49Q70CQ1 688 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 LINC01465Q8N7H1 131 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 KRI1Q8N9T8 703 aaKnown RBP18.62■□□□□ 0.57
SMCO4-204ENST00000527149 ZNF579Q8NAF0 562 aaKnown RBP18.62■□□□□ 0.57
SMCO4-204ENST00000527149 LRRC15Q8TF66 581 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 LEO1Q8WVC0 666 aaPredicted RBP18.62■□□□□ 0.57
SMCO4-204ENST00000527149 DPF3Q92784 378 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 TNPO1Q92973 898 aaKnown RBP18.62■□□□□ 0.57
SMCO4-204ENST00000527149 PNMA5Q96PV4 448 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 SH2D3AQ9BRG2 576 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 NRBP2Q9NSY0 501 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 UMODL1Q5DID0 1318 aa18.62■□□□□ 0.57
SMCO4-204ENST00000527149 DDX11L8A8MPP1 907 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 KRT85P78386 507 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 GRB10Q13322 594 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 TMEM119Q4V9L6 283 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 KRT79Q5XKE5 535 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 TRAF7Q6Q0C0 670 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 MTHFD1LQ6UB35 978 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 KCNK18Q7Z418 384 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 KCNG4Q8TDN1 519 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 WNT8AQ9H1J5 351 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 CYP26B1Q9NR63 512 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 TMEM39AQ9NV64 488 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 CFAP45Q9UL16 551 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 ZMYND8Q9ULU4 1186 aaPredicted RBP18.61■□□□□ 0.57
SMCO4-204ENST00000527149 PCDHA2Q9Y5H9 948 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 STK24Q9Y6E0 443 aa18.61■□□□□ 0.57
SMCO4-204ENST00000527149 LAMA2P24043 3122 aaKnown RBP18.6■□□□□ 0.57
SMCO4-204ENST00000527149 A0A087WWV3 80 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 IGKV6-21A0A0C4DH24 114 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 SLC26A4O43511 780 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 KLRC1P26715 233 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 RARRES1P49788 294 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 MTERF2Q49AM1 385 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 SPECC1Q5M775 1068 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 TAF2Q6P1X5 1199 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 RPAINQ86UA6 219 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 CABP7Q86V35 215 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 TET1Q8NFU7 2136 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 PIGOQ8TEQ8 1089 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 SYMPKQ92797 1274 aaKnown RBP18.6■□□□□ 0.57
SMCO4-204ENST00000527149 EPSTI1Q96J88 318 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 CCSER1Q9C0I3 900 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 HIPK3Q9H422 1215 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 PRDM5Q9NQX1 630 aaPredicted RBP18.6■□□□□ 0.57
SMCO4-204ENST00000527149 ANKEF1Q9NU02 776 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 NOD1Q9Y239 953 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 SCN5AQ14524 2016 aa18.6■□□□□ 0.57
SMCO4-204ENST00000527149 LAMA3Q16787 3333 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 KDM3AQ9Y4C1 1321 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 PITPNM1O00562 1244 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 XRCC6P12956 609 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMCO4-204ENST00000527149 MKRN4PQ13434 485 aaPredicted RBP18.59■□□□□ 0.57
SMCO4-204ENST00000527149 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 NACC1Q96RE7 527 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 DHX33Q9H6R0 707 aaKnown RBP18.59■□□□□ 0.57
SMCO4-204ENST00000527149 DDX19AQ9NUU7 478 aaKnown RBP18.59■□□□□ 0.57
SMCO4-204ENST00000527149 DBR1Q9UK59 544 aaKnown RBP18.59■□□□□ 0.57
SMCO4-204ENST00000527149 PCDHA7Q9UN72 937 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 PPME1Q9Y570 386 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 NR2E3Q9Y5X4 410 aa18.59■□□□□ 0.57
SMCO4-204ENST00000527149 SMIM35A0A1B0GVV1 85 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 CUTAO60888 179 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 MAFO75444 373 aaPredicted RBP18.58■□□□□ 0.56
SMCO4-204ENST00000527149 TIMP1P01033 207 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 CKBP12277 381 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 SYN1P17600 705 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 CYP2C18P33260 490 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 UBA7P41226 1012 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 KARSQ15046 597 aaKnown RBP18.58■□□□□ 0.56
SMCO4-204ENST00000527149 XKR9Q5GH70 373 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 SHC4Q6S5L8 630 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 KIAA0319LQ8IZA0 1049 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 VWCEQ96DN2 955 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 CEP170P1Q96L14 293 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 PPP1R12CQ9BZL4 782 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 XPNPEP1Q9NQW7 623 aa18.58■□□□□ 0.56
SMCO4-204ENST00000527149 A0A087X0B3 334 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 H0YGN5 161 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 RBAK-RBAKDNI3L0D1 243 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 MAGEB2O15479 319 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 CAND2O75155 1236 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 NCLP19338 710 aaKnown RBP18.57■□□□□ 0.56
SMCO4-204ENST00000527149 CLCN3P51790 818 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 TBC1D8BQ0IIM8 1120 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 DRP2Q13474 957 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 BFSP2Q13515 415 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 MBTPS1Q14703 1052 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 OTUD6AQ7L8S5 288 aa18.57■□□□□ 0.56
SMCO4-204ENST00000527149 LRRC71Q8N4P6 559 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms