RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DRP2Q13474 957 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 MTHFD1LQ6UB35 978 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 CABP7Q86V35 215 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 SERINC5Q86VE9 423 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 C7orf31Q8N865 590 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 SNX29Q8TEQ0 813 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 ATP6V0A1Q93050 837 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 TRIM43Q96BQ3 446 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-205ENST00000527046 SPATA32Q96LK8 384 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 SEZ6LQ9BYH1 1024 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 XPNPEP1Q9NQW7 623 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 CYP26B1Q9NR63 512 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 NRBP2Q9NSY0 501 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 ZNF215Q9UL58 517 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-205ENST00000527046 KIAA1024Q9UPX6 916 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 ATP6V1DQ9Y5K8 247 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 ARID2Q68CP9 1835 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 UMODL1Q5DID0 1318 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 FAM237AA0A1B0GTK4 181 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 C17orf102A2RUQ5 167 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 MAFO75444 373 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-205ENST00000527046 PPFIA1Q13136 1202 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 KARSQ15046 597 aaKnown RBP12.05□□□□□ -0.48
NEDD8-205ENST00000527046 E2F4Q16254 413 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 PTGISQ16647 500 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 ZNF484Q5JVG2 852 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 KRT79Q5XKE5 535 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 ADALQ6DHV7 355 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 KIAA0319LQ8IZA0 1049 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 PANK2Q9BZ23 570 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 SCAND2PQ9GZW5 306 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-205ENST00000527046 DHX33Q9H6R0 707 aaKnown RBP12.05□□□□□ -0.48
NEDD8-205ENST00000527046 ANKEF1Q9NU02 776 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 DDX19AQ9NUU7 478 aaKnown RBP12.05□□□□□ -0.48
NEDD8-205ENST00000527046 DBR1Q9UK59 544 aaKnown RBP12.05□□□□□ -0.48
NEDD8-205ENST00000527046 HPSEQ9Y251 543 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 PCDHA2Q9Y5H9 948 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 COL1A2P08123 1366 aa12.05□□□□□ -0.48
NEDD8-205ENST00000527046 RRN3P2A6NIE6 340 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 SLC26A4O43511 780 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 PQBP1O60828 265 aaKnown RBP12.04□□□□□ -0.48
NEDD8-205ENST00000527046 GADD45BO75293 160 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-205ENST00000527046 CAPN15O75808 1086 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 CMA1P23946 247 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 IGBP1P78318 339 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 RBL2Q08999 1139 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 MTERF2Q49AM1 385 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 ARSHQ5FYA8 562 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 FAM47CQ5HY64 1035 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 CKAP2LQ8IYA6 745 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 FAM167AQ96KS9 214 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 NACC1Q96RE7 527 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 MTRQ99707 1265 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 NOC4LQ9BVI4 516 aaKnown RBP12.04□□□□□ -0.48
NEDD8-205ENST00000527046 RAB34Q9BZG1 259 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 TCEAL9Q9UHQ7 104 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 DNAH12Q6ZR08 3092 aa12.04□□□□□ -0.48
NEDD8-205ENST00000527046 SIP14410 1827 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 KIAA0355O15063 1070 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 EYA4O95677 639 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 CHRNA1P02708 482 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 PLCG1P19174 1290 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 NCLP19338 710 aaKnown RBP12.03□□□□□ -0.48
NEDD8-205ENST00000527046 UBA7P41226 1012 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 ME1P48163 572 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 SLC12A3P55017 1021 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 PTK7Q13308 1070 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 MBTPS1Q14703 1052 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 XKR9Q5GH70 373 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 HAUS3Q68CZ6 603 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 C1orf186Q6ZWK4 172 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 DNAJB3Q8WWF6 145 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 WNT8AQ9H1J5 351 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 BHMT2Q9H2M3 363 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 GOLPH3LQ9H4A5 285 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 CDHR5Q9HBB8 845 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 POLD4Q9HCU8 107 aa12.03□□□□□ -0.48
NEDD8-205ENST00000527046 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-205ENST00000527046 SEPT9Q9UHD8 586 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-205ENST00000527046 A0A1B0GVL5 298 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 SMIM35A0A1B0GVV1 85 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 A0A1W2PQ27 194 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 A0A1W2PQ64 194 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 A0A1W2PQD8 194 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 DCDC2CA8MYV0 355 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 DKC1O60832 514 aaKnown RBP eCLIP12.02□□□□□ -0.49
NEDD8-205ENST00000527046 CLTBP09497 229 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 ARL2P36404 184 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 MGAT3Q09327 533 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 MAPK7Q13164 816 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 FAM26DQ5JW98 314 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 RINT1Q6NUQ1 792 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms