RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 SH2B1Q9NRF2 756 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-216ENST00000526055 GJB4Q9NTQ9 266 aa20.79■□□□□ 0.92
TSPAN4-216ENST00000526055 MMP1P03956 469 aa20.78■□□□□ 0.92
TSPAN4-216ENST00000526055 ODR4Q5SWX8 454 aa20.78■□□□□ 0.92
TSPAN4-216ENST00000526055 TMCO2Q7Z6W1 182 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-216ENST00000526055 KIAA0319LQ8IZA0 1049 aa20.78■□□□□ 0.92
TSPAN4-216ENST00000526055 SP7Q8TDD2 431 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-216ENST00000526055 TNFRSF25Q93038 417 aa20.78■□□□□ 0.92
TSPAN4-216ENST00000526055 CHMP2AO43633 222 aa20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 SLC37A4O43826 429 aa20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 ZNF862O60290 1169 aa20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 CCNT1O60563 726 aaKnown RBP20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 JAK2O60674 1132 aa20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 PRKCEQ02156 737 aa20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 ST3GAL1Q11201 340 aa20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 PPP2R5CQ13362 524 aa20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 TGS1Q96RS0 853 aaKnown RBP20.77■□□□□ 0.92
TSPAN4-216ENST00000526055 LCHNA4D1U4 455 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 LINC01553A4QN01 128 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 GTPBP6O43824 516 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 ARHGEF15O94989 841 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 IGFBP4P22692 258 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 TMOD1P28289 359 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 ERVK-21P61565 698 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 HMGN5P82970 282 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 XKR3Q5GH77 459 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 SLFN12Q8IYM2 578 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 ARNTL2Q8WYA1 636 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 GJA10Q969M2 543 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 SAMD11Q96NU1 681 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 AGO3Q9H9G7 860 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 UPF2Q9HAU5 1272 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 COL4A6Q14031 1691 aa20.76■□□□□ 0.91
TSPAN4-216ENST00000526055 VCANP13611 3396 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 ENPP3O14638 875 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 DKC1O60832 514 aaKnown RBP eCLIP20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 CD52P31358 61 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 PAK2Q13177 524 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 NR5A1Q13285 461 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 RABEP1Q15276 862 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 KRT40Q6A162 431 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 FAM117BQ6P1L5 589 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 DIS3L2Q8IYB7 885 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 MAP7D2Q96T17 732 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 YME1L1Q96TA2 773 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 NIFKQ9BYG3 293 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 LMCD1Q9NZU5 365 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 PADI3Q9ULW8 664 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 SIP14410 1827 aa20.75■□□□□ 0.91
TSPAN4-216ENST00000526055 BAG4O95429 457 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 CRYBB1P53674 252 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 PSMC5P62195 406 aa20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 TMEM62Q0P6H9 643 aa20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 SAFBQ15424 915 aaKnown RBP eCLIP20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 TARBP2Q15633 366 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 UGCGQ16739 394 aa20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 EARS2Q5JPH6 523 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 CCDC83Q8IWF9 413 aa20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 METTL13Q8N6R0 699 aa20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 LINC01465Q8N7H1 131 aa20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 VAV3Q9UKW4 847 aa20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 CHD7Q9P2D1 2997 aa20.74■□□□□ 0.91
TSPAN4-216ENST00000526055 BTBD18B2RXH4 712 aa20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 MARCH6O60337 910 aa20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 DTNBO60941 627 aa20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 EFCAB12Q6NXP0 572 aa20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 TRMT1LQ7Z2T5 733 aaKnown RBP20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 HAS1Q92839 578 aa20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 TSPYL2Q9H2G4 693 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 CERS4Q9HA82 394 aa20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 RNF216Q9NWF9 866 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 PPME1Q9Y570 386 aa20.73■□□□□ 0.91
TSPAN4-216ENST00000526055 WDR81Q562E7 1941 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 TTC3P53804 2025 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 EPOPA6NHQ4 379 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 GPR182O15218 404 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 ST18O60284 1047 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 RPS6KA5O75582 802 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 UPP2O95045 317 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 CDC42EP1Q00587 391 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 TBC1D8BQ0IIM8 1120 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 C8orf76Q96K31 380 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 JPH2Q9BR39 696 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 MTCH2Q9Y6C9 303 aa20.72■□□□□ 0.91
TSPAN4-216ENST00000526055 TRANK1O15050 2925 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 GPR32O75388 356 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 STBD1O95210 358 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 P4HBP07237 508 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 STAG3L1P0CL83 205 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 QARSP47897 775 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 GRB10Q13322 594 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 EPHA7Q15375 998 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 NPAS4Q8IUM7 802 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 ERVK-5Q9HDB9 667 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 SEPT9Q9UHD8 586 aaPredicted RBP20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 GINS2Q9Y248 185 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 RWDD3Q9Y3V2 267 aa20.71■□□□□ 0.91
TSPAN4-216ENST00000526055 EVPLQ92817 2033 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms