RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 VTNP04004 478 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 BMP1P13497 986 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 SLC26A2P50443 739 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 KRT76Q01546 638 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 IER5Q5VY09 327 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 MCTP2Q6DN12 878 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 TMEM192Q8IY95 271 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 BLIDQ8IZY5 108 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 CRIPAKQ8N1N5 446 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 ZNF668Q96K58 619 aaPredicted RBP13.65□□□□□ -0.22
SSBP3-210ENST00000525990 NOC2LQ9Y3T9 749 aaKnown RBP13.65□□□□□ -0.22
SSBP3-210ENST00000525990 SAMM50Q9Y512 469 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 COL1A2P08123 1366 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 MUC3AQ02505 3323 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 M0QZ92 97 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 PSAPP07602 524 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 CLCN3P51790 818 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 AK2P54819 239 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 PAK2Q13177 524 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 GPM6BQ13491 265 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 INF2Q27J81 1249 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 KIZQ2M2Z5 673 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 PAN2Q504Q3 1202 aaKnown RBP13.64□□□□□ -0.23
SSBP3-210ENST00000525990 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-210ENST00000525990 LRRC71Q8N4P6 559 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 FIBCD1Q8N539 461 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 NECAB1Q8N987 351 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 OXER1Q8TDS5 423 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 SLC5A5Q92911 643 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 ZNF689Q96CS4 500 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-210ENST00000525990 IL17RAQ96F46 866 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 UHRF1Q96T88 793 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-210ENST00000525990 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-210ENST00000525990 ERVK-5Q9HDB9 667 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 PCDHA10Q9Y5I2 948 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 TTC28Q96AY4 2481 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 KDM3AQ9Y4C1 1321 aa13.64□□□□□ -0.23
SSBP3-210ENST00000525990 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 WDR64B1ANS9 1081 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 H3BNC9 293 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 SLC37A4O43826 429 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 GAS7O60861 476 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 PSMD10O75832 226 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 DGKIO75912 1065 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 CTNNB1P35222 781 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 USP11P51784 963 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 PRKCEQ02156 737 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 NFX1Q12986 1120 aaKnown RBP13.63□□□□□ -0.23
SSBP3-210ENST00000525990 ZNF484Q5JVG2 852 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 LRCH2Q5VUJ6 765 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 METTL13Q8N6R0 699 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 BBXQ8WY36 941 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-210ENST00000525990 HLA-CQ95604 372 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 OSMRQ99650 979 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 SH2D3AQ9BRG2 576 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 PHF20Q9BVI0 1012 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 SLKQ9H2G2 1235 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-210ENST00000525990 DISC1Q9NRI5 854 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 TCEAL9Q9UHQ7 104 aa13.63□□□□□ -0.23
SSBP3-210ENST00000525990 MRPL42Q9Y6G3 142 aaKnown RBP13.63□□□□□ -0.23
SSBP3-210ENST00000525990 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 GRM6O15303 877 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 PFKFB2O60825 505 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 GPR32O75388 356 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 OATP04181 439 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 BTG3Q14201 252 aaPredicted RBP13.62□□□□□ -0.23
SSBP3-210ENST00000525990 EARS2Q5JPH6 523 aaKnown RBP13.62□□□□□ -0.23
SSBP3-210ENST00000525990 FAM228AQ86W67 206 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 LINC01465Q8N7H1 131 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 ETNPPLQ8TBG4 499 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 TNPO1Q92973 898 aaKnown RBP13.62□□□□□ -0.23
SSBP3-210ENST00000525990 MRPL38Q96DV4 380 aaKnown RBP13.62□□□□□ -0.23
SSBP3-210ENST00000525990 MBOAT7Q96N66 472 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 TEKT3Q9BXF9 490 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 LMCD1Q9NZU5 365 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 SQORQ9Y6N5 450 aa13.62□□□□□ -0.23
SSBP3-210ENST00000525990 CYP3A7-CYP3A51PA0A087WV96 503 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 RPS6KA5O75582 802 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 RPLP2P05387 115 aaKnown RBP13.61□□□□□ -0.23
SSBP3-210ENST00000525990 FDPSP14324 419 aaKnown RBP13.61□□□□□ -0.23
SSBP3-210ENST00000525990 CYP3A7P24462 503 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 FOSBP53539 338 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 DRP2Q13474 957 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 NONOQ15233 471 aaKnown RBP eCLIP13.61□□□□□ -0.231e-6■■■□□ 17.3
SSBP3-210ENST00000525990 ME3Q16798 604 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 LETM2Q2VYF4 491 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 Q4G0T1 1027 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 TCEAL5Q5H9L2 206 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
SSBP3-210ENST00000525990 B3GNT9Q6UX72 402 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 NME8Q8N427 588 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 SAMD11Q96NU1 681 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 RIT2Q99578 217 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 UBE2ZQ9H832 354 aaPredicted RBP13.61□□□□□ -0.23
SSBP3-210ENST00000525990 ST3GAL5Q9UNP4 418 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 COG5Q9UP83 839 aa13.61□□□□□ -0.23
SSBP3-210ENST00000525990 STK36Q9NRP7 1315 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms