RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 MIS18BP1Q6P0N0 1132 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 RUFY3Q7L099 469 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 TRMT1LQ7Z2T5 733 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 KIAA0319LQ8IZA0 1049 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 BANK1Q8NDB2 785 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 CCDC12Q8WUD4 166 aaPredicted RBP13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 CLP1Q92989 425 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 GJA10Q969M2 543 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 ZSWIM6Q9HCJ5 1215 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 ERVK-5Q9HDB9 667 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 GINS2Q9Y248 185 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 NOC2LQ9Y3T9 749 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 MAFBQ9Y5Q3 323 aaPredicted RBP13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 MRPL42Q9Y6G3 142 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 SQORQ9Y6N5 450 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 COL1A2P08123 1366 aa13.41□□□□□ -0.26
CLNS1A-202ENST00000525064 H3BQ06 376 aaPredicted RBP13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 MSH4O15457 936 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 DTNBO60941 627 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 COL9A1P20849 921 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 GNA11P29992 359 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 BMPR1AP36894 532 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 AKAP17AQ02040 695 aaKnown RBP13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 BTG3Q14201 252 aaPredicted RBP13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 PTPROQ16827 1216 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 LEXMQ3ZCV2 418 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 ZNF746Q6NUN9 644 aaPredicted RBP13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 NPAS4Q8IUM7 802 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 TNPO1Q92973 898 aaKnown RBP13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 AIFM3Q96NN9 605 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 UPF3BQ9BZI7 483 aaKnown RBP13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 NSUN3Q9H649 340 aaKnown RBP13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 EPHX3Q9H6B9 360 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 GABBR1Q9UBS5 961 aa13.4□□□□□ -0.26
CLNS1A-202ENST00000525064 ZNF862O60290 1169 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 VTNP04004 478 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 RPLP2P05387 115 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 CLCN3P51790 818 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 NFX1Q12986 1120 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 STK3Q13188 491 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 NPY5RQ15761 445 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 UGCGQ16739 394 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 ZNF484Q5JVG2 852 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 FAM228AQ86W67 206 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 CKAP2LQ8IYA6 745 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 NME8Q8N427 588 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 CCDC148Q8NFR7 591 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 OSMRQ99650 979 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 TBC1D22BQ9NU19 505 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
CLNS1A-202ENST00000525064 GPR32O75388 356 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 TDP2O95551 362 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 RB1P06400 928 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 PSAPP07602 524 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 DNAJB1P25685 340 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 GTF2F1P35269 517 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 NLRP5P59047 1200 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 HYAL1Q12794 435 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 CAMK1Q14012 370 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 COL19A1Q14993 1142 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 KIZQ2M2Z5 673 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 MCTP2Q6DN12 878 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 PTCRAQ6ISU1 281 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 SMAP1Q8IYB5 467 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 CMTR2Q8IYT2 770 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 LINC01465Q8N7H1 131 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 BICD2Q8TD16 824 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 PABPC5Q96DU9 382 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 ZNF668Q96K58 619 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 C11orf84Q9BUA3 381 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 UNC45AQ9H3U1 944 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 ALG13Q9NP73 1137 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 ARID2Q68CP9 1835 aa13.38□□□□□ -0.27
CLNS1A-202ENST00000525064 M0R2N6 131 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 CHMP2AO43633 222 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 RPS6KA5O75582 802 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 MMP1P03956 469 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 ITGB1P05556 798 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 LTBRP36941 435 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 SARSP49591 514 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 DLX2Q07687 328 aaPredicted RBP13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 EP400NLQ6ZTU2 488 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 FAM178BQ8IXR5 827 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 LRRC71Q8N4P6 559 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 TBCKQ8TEA7 893 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 SLC5A5Q92911 643 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 ADAM2Q99965 735 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 LMAN2LQ9H0V9 348 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 SH3GLB2Q9NR46 395 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 CLDND1Q9NY35 253 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 ST3GAL5Q9UNP4 418 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 RWDD3Q9Y3V2 267 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
CLNS1A-202ENST00000525064 CYP46A1Q9Y6A2 500 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms