RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 RSPH10BP0C881 870 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 ZBTB48P10074 688 aaPredicted RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 SLC9A1P19634 815 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 MAGEA9P43362 315 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 CARSP49589 748 aaKnown RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 IRAK1P51617 712 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 PSMC6P62333 389 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 CUL1Q13616 776 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 ENOX2Q16206 610 aaKnown RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 SLC15A2Q16348 729 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 SHROOM1Q2M3G4 852 aaPredicted RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 DNAJC21Q5F1R6 531 aaKnown RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 BTNL9Q6UXG8 535 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 LRIG3Q6UXM1 1119 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 H2AFVQ71UI9 128 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 ZFPM1Q8IX07 1006 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 C10orf67Q8IYJ2 551 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 SEPT12Q8IYM1 358 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 TPCN2Q8NHX9 752 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 ACTRT1Q8TDG2 376 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 SLC35C1Q96A29 364 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 ARL8AQ96BM9 186 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 UIMC1Q96RL1 719 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 MKNK1Q9BUB5 465 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 MRIQ9BWK5 157 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 EPB41L5Q9HCM4 733 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 TUFT1Q9NNX1 390 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 TMEM51Q9NW97 253 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 ADAMTS1Q9UHI8 967 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 NAGPAQ9UK23 515 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 AJAP1Q9UKB5 411 aaPredicted RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 PACSIN2Q9UNF0 486 aaPredicted RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 AFF2P51816 1311 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 ESYT3A0FGR9 886 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 ZSCAN5CA6NGD5 496 aaPredicted RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 CCDC188H7C350 402 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 KCNK3O14649 394 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 OPLAHO14841 1288 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 PPP1R12BO60237 982 aaPredicted RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 ZEB2O60315 1214 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 GDF11O95390 407 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 GCNT3O95395 438 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 CPP00450 1065 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 FAM153BP0C7A2 387 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 SLURP2P0DP57 97 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 BMP3P12645 472 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 STAT1P42224 750 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 NPEPPSP55786 919 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 ERVK-9P63128 1117 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 CYP4A11Q02928 519 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 TRAF1Q13077 416 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 IKQ13123 557 aaPredicted RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 ABCB5Q2M3G0 1257 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 FAM153CQ494X1 144 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 USH1GQ495M9 461 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 DACT2Q5SW24 774 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 MEX3CQ5U5Q3 659 aaKnown RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 TCERG1LQ5VWI1 586 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 ALKBH5Q6P6C2 394 aaKnown RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 PODNQ7Z5L7 613 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 SLFN11Q7Z7L1 901 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 FMNL3Q8IVF7 1028 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 EFCAB13Q8IY85 973 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 FAM186BQ8IYM0 893 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 SYCE1Q8N0S2 351 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 OLIG1Q8TAK6 271 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 RBM46Q8TBY0 533 aaKnown RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 EIF2AK1Q9BQI3 630 aaKnown RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 ISCUQ9H1K1 167 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 BHMT2Q9H2M3 363 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 PLEKHA4Q9H4M7 779 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 TAF1DQ9H5J8 278 aaPredicted RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 SLITRK6Q9H5Y7 841 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 SUCLA2Q9P2R7 463 aaPredicted RBP9.74□□□□□ -0.85
PKP3-202ENST00000524646 SEL1LQ9UBV2 794 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 FAM153AQ9UHL3 310 aa9.74□□□□□ -0.85
PKP3-202ENST00000524646 SIP14410 1827 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 IGLV3-22A0A075B6J6 115 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 SRRM3A6NNA2 597 aaPredicted RBP9.73□□□□□ -0.85
PKP3-202ENST00000524646 HMGB1P1B2RPK0 211 aaPredicted RBP9.73□□□□□ -0.85
PKP3-202ENST00000524646 F5H6K3 240 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 F8VZ95 297 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 EML1O00423 815 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 CEP104O60308 925 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 ENTPD3O75355 529 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 TAL1P17542 331 aaPredicted RBP9.73□□□□□ -0.85
PKP3-202ENST00000524646 LMNB1P20700 586 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 MUTP22033 750 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 RFX1P22670 979 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 ALDH1B1P30837 517 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 SOX5P35711 763 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 PDE6BP35913 854 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 ZNF76P36508 570 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 NOP2P46087 812 aaKnown RBP9.73□□□□□ -0.85
PKP3-202ENST00000524646 CCT5P48643 541 aa9.73□□□□□ -0.85
PKP3-202ENST00000524646 CASP4P49662 377 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms