RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 EYA4O95677 639 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 FERP16591 822 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 STAT3P40763 770 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 HDLBPQ00341 1268 aaKnown RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 ARID5AQ03989 594 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 CERKLQ49MI3 558 aaPredicted RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 PRR16Q569H4 304 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 TMEM179Q6ZVK1 233 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 SLFN11Q7Z7L1 901 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 SCFD2Q8WU76 684 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 CCDC43Q96MW1 224 aaKnown RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 IDI2Q9BXS1 227 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 ZHX3Q9H4I2 956 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 RGPD3A6NKT7 1758 aaPredicted RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 RGPD4Q7Z3J3 1758 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 LOXHD1Q8IVV2 1947 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 A0A087WUV0 522 aaPredicted RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 BHMG1C9JSJ3 638 aaPredicted RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 PGRMC1O00264 195 aaKnown RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 NR3C1P04150 777 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 MUTP22033 750 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 ALDH1B1P30837 517 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 CASP5P51878 434 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 CACNB1Q02641 598 aaPredicted RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 DOK7Q18PE1 504 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 TATDN1Q6P1N9 297 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 ALKBH5Q6P6C2 394 aaKnown RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 FBXO11Q86XK2 927 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 BCAS4Q8TDM0 211 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 CASKIN2Q8WXE0 1202 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 MASTLQ96GX5 879 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 PACSIN1Q9BY11 444 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 EFCC1Q9HA90 598 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 SUCLA2Q9P2R7 463 aaPredicted RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 ASTN1O14525 1302 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 PIK3CDO00329 1044 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 KCNK3O14649 394 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 SLC9A1P19634 815 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 HOXD13P35453 343 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 CRKP46108 304 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 PABPC4Q13310 644 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD7-202ENST00000524602 B4GALNT4Q76KP1 1039 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 RASGEF1CQ8N431 466 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 IFT81Q8WYA0 676 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 ZNF622Q969S3 477 aaKnown RBP eCLIP9.07□□□□□ -0.962e-6■■■□□ 14.6
CHD7-202ENST00000524602 ARL8AQ96BM9 186 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 LRRC45Q96CN5 670 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.07□□□□□ -0.962e-6■■■□□ 15
CHD7-202ENST00000524602 DNAJC18Q9H819 358 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 TUFT1Q9NNX1 390 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 KCNG1Q9UIX4 513 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 VAV3Q9UKW4 847 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 DIS3Q9Y2L1 958 aaKnown RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 ZNF233A6NK53 670 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 RAD51CO43502 376 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 BRD2P25440 801 aaKnown RBP9.07□□□□□ -0.96
CHD7-202ENST00000524602 CLUL1Q15846 466 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 BTNL9Q6UXG8 535 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 GPIHBP1Q8IV16 184 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 TPCN2Q8NHX9 752 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 SLC35C1Q96A29 364 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 HINFPQ9BQA5 517 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 SLITRK6Q9H5Y7 841 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 SIX2Q9NPC8 291 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 RABGAP1Q9Y3P9 1069 aa9.07□□□□□ -0.96
CHD7-202ENST00000524602 COL2A1P02458 1487 aaPredicted RBP9.06□□□□□ -0.96
CHD7-202ENST00000524602 SLX4Q8IY92 1834 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 AKAP3O75969 853 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 H2AFZP0C0S5 128 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 FAM153BP0C7A2 387 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 CCDC172P0C7W6 258 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 ACTN1P12814 892 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 SCNN1DP51172 638 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 ICA1Q05084 483 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 FAM153CQ494X1 144 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 SYDE2Q5VT97 1194 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.06□□□□□ -0.96
CHD7-202ENST00000524602 H2AFVQ71UI9 128 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 PODNQ7Z5L7 613 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 CNPY4Q8N129 248 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 PIK3R5Q8WYR1 880 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 ATP6V1G3Q96LB4 118 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 PAGR1Q9BTK6 254 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 TMX4Q9H1E5 349 aaPredicted RBP9.06□□□□□ -0.96
CHD7-202ENST00000524602 GCNT4Q9P109 453 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 SEL1LQ9UBV2 794 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 FAM153AQ9UHL3 310 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 TTC7AQ9ULT0 858 aaPredicted RBP9.06□□□□□ -0.96
CHD7-202ENST00000524602 GOLGA6L10A6NI86 522 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 ZBTB48P10074 688 aaPredicted RBP9.06□□□□□ -0.96
CHD7-202ENST00000524602 STAT1P42224 750 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 NOP2P46087 812 aaKnown RBP9.06□□□□□ -0.96
CHD7-202ENST00000524602 CCT5P48643 541 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 PSMC6P62333 389 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 MRPS25P82663 173 aaKnown RBP9.06□□□□□ -0.96
CHD7-202ENST00000524602 NFIAQ12857 509 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 MTMR3Q13615 1198 aa9.06□□□□□ -0.96
CHD7-202ENST00000524602 PPP2R5EQ16537 467 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms