RNA–Protein interactions for RNA: ENST00000524296.5

SFI1-228, Transcript of SFI1 centrin binding protein, humanhuman

TSL 5

Gene SFI1, Length 2,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-228ENST00000524296 SLC9A1P19634 815 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 CASP5P51878 434 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 SPIRE1Q08AE8 756 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 KCTD16Q68DU8 428 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 TTC19Q6DKK2 380 aaPredicted RBP17.15■□□□□ 0.34
SFI1-228ENST00000524296 SYT2Q8N9I0 419 aaPredicted RBP17.15■□□□□ 0.34
SFI1-228ENST00000524296 ETNPPLQ8TBG4 499 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 CALR3Q96L12 384 aaKnown RBP17.15■□□□□ 0.34
SFI1-228ENST00000524296 CCDC17Q96LX7 622 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 UIMC1Q96RL1 719 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 MRIQ9BWK5 157 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 ISCUQ9H1K1 167 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 ATXN2Q99700 1313 aaKnown RBP17.15■□□□□ 0.34
SFI1-228ENST00000524296 HMGB1P1B2RPK0 211 aaPredicted RBP17.15■□□□□ 0.34
SFI1-228ENST00000524296 FLOT1O75955 427 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 XRCC5P13010 732 aaKnown RBP17.15■□□□□ 0.34
SFI1-228ENST00000524296 PON1P27169 355 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 RNASE9P60153 205 aaKnown RBP17.15■□□□□ 0.34
SFI1-228ENST00000524296 CUL1Q13616 776 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 B4GALNT4Q76KP1 1039 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 SFR1Q86XK3 245 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 CATSPER3Q86XQ3 398 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 KLHL7Q8IXQ5 586 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 LRRC57Q8N9N7 239 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 SCFD2Q8WU76 684 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 CNKSR1Q969H4 720 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 ATP6V1G3Q96LB4 118 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 NAGPAQ9UK23 515 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 FBXL5Q9UKA1 691 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
SFI1-228ENST00000524296 NDUFAB1O14561 156 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 SLC16A3O15427 465 aaKnown RBP17.14■□□□□ 0.33
SFI1-228ENST00000524296 NR1D1P20393 614 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 RPA1P27694 616 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 HDLBPQ00341 1268 aaKnown RBP17.14■□□□□ 0.33
SFI1-228ENST00000524296 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
SFI1-228ENST00000524296 LRIG3Q6UXM1 1119 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 SPATS2Q86XZ4 545 aaKnown RBP17.14■□□□□ 0.33
SFI1-228ENST00000524296 DCAF4Q8WV16 495 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 CRYGNQ8WXF5 182 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 METTL14Q9HCE5 456 aaKnown RBP17.14■□□□□ 0.33
SFI1-228ENST00000524296 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 COL4A5P29400 1685 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 ATP1A2P50993 1020 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 ARHGAP4P98171 946 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 EPHA7Q15375 998 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 BMT2Q1RMZ1 405 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 POTEAQ6S8J7 498 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 VPS36Q86VN1 386 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 MICALL1Q8N3F8 863 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 REEP2Q9BRK0 252 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 RABEP2Q9H5N1 569 aa17.14■□□□□ 0.33
SFI1-228ENST00000524296 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.33
SFI1-228ENST00000524296 A0A0A6YYK5 440 aaPredicted RBP17.13■□□□□ 0.33
SFI1-228ENST00000524296 PGRMC1O00264 195 aaKnown RBP17.13■□□□□ 0.33
SFI1-228ENST00000524296 CEP104O60308 925 aa17.13■□□□□ 0.33
SFI1-228ENST00000524296 RPL13P26373 211 aaKnown RBP17.13■□□□□ 0.33
SFI1-228ENST00000524296 HOXD13P35453 343 aa17.13■□□□□ 0.33
SFI1-228ENST00000524296 ERVK-9P63128 1117 aa17.13■□□□□ 0.33
SFI1-228ENST00000524296 Q4G0T1 1027 aa17.13■□□□□ 0.33
SFI1-228ENST00000524296 LMBR1Q8WVP7 490 aa17.13■□□□□ 0.33
SFI1-228ENST00000524296 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
SFI1-228ENST00000524296 SERPINA10Q9UK55 444 aa17.13■□□□□ 0.33
SFI1-228ENST00000524296 INTUQ9ULD6 942 aa17.13■□□□□ 0.33
SFI1-228ENST00000524296 PLAAQ9Y263 795 aa17.13■□□□□ 0.33
SFI1-228ENST00000524296 BHMG1C9JSJ3 638 aaPredicted RBP17.12■□□□□ 0.33
SFI1-228ENST00000524296 MEIS2O14770 477 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 ERLIN2O94905 339 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
SFI1-228ENST00000524296 LSP1P33241 339 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 PSMC6P62333 389 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 PABPC4Q13310 644 aaKnown RBP eCLIP17.12■□□□□ 0.33
SFI1-228ENST00000524296 HLTFQ14527 1009 aaKnown RBP eCLIP17.12■□□□□ 0.33
SFI1-228ENST00000524296 PRR16Q569H4 304 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 MAATS1Q7Z4T9 603 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 TPCN2Q8NHX9 752 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 RBM46Q8TBY0 533 aaKnown RBP17.12■□□□□ 0.33
SFI1-228ENST00000524296 EPN3Q9H201 632 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
SFI1-228ENST00000524296 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 ASTN1O14525 1302 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 GOLGA6L10A6NI86 522 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 SRRM3A6NNA2 597 aaPredicted RBP17.12■□□□□ 0.33
SFI1-228ENST00000524296 CCDC188H7C350 402 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 C21orf2O43822 256 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 AKAP3O75969 853 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 NR3C1P04150 777 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 SPATA31C1P0DKV0 1188 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 JAM2P57087 298 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 TRADDQ15628 312 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 DCAF17Q5H9S7 520 aaPredicted RBP17.12■□□□□ 0.33
SFI1-228ENST00000524296 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 MKL1Q969V6 931 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 LRRC45Q96CN5 670 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 FAM20AQ96MK3 541 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.12■□□□□ 0.332e-7■■■□□ 19
SFI1-228ENST00000524296 SIX2Q9NPC8 291 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 STK32BQ9NY57 414 aa17.12■□□□□ 0.33
SFI1-228ENST00000524296 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms