RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 FBXO21O94952 628 aa7.77□□□□□ -1.17
SKP1-213ENST00000524288 DLX2Q07687 328 aaPredicted RBP7.77□□□□□ -1.17
SKP1-213ENST00000524288 PIN1Q13526 163 aaPredicted RBP7.77□□□□□ -1.17
SKP1-213ENST00000524288 SEC23AQ15436 765 aa7.77□□□□□ -1.17
SKP1-213ENST00000524288 ZFYVE27Q5T4F4 411 aa7.77□□□□□ -1.17
SKP1-213ENST00000524288 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
SKP1-213ENST00000524288 STEAP3Q658P3 488 aa7.77□□□□□ -1.17
SKP1-213ENST00000524288 CHMP4CQ96CF2 233 aa7.77□□□□□ -1.17
SKP1-213ENST00000524288 RTFDC1Q9BY42 306 aaPredicted RBP7.77□□□□□ -1.17
SKP1-213ENST00000524288 NTMQ9P121 344 aa7.77□□□□□ -1.17
SKP1-213ENST00000524288 TELO2Q9Y4R8 837 aa7.77□□□□□ -1.17
SKP1-213ENST00000524288 CYP2C8P10632 490 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 SCAND1P57086 179 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 SESN3P58005 492 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 ETV3LQ6ZN32 361 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 MIB1Q86YT6 1006 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 CARFQ8N187 725 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 LINC00482Q8N8I6 264 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 UHMK1Q8TAS1 419 aaKnown RBP7.76□□□□□ -1.17
SKP1-213ENST00000524288 ZNF526Q8TF50 670 aaPredicted RBP7.76□□□□□ -1.17
SKP1-213ENST00000524288 KRTAP4-2Q9BYR5 136 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 BCAS3Q9H6U6 928 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 TOPORSQ9NS56 1045 aaPredicted RBP7.76□□□□□ -1.17
SKP1-213ENST00000524288 CNOT11Q9UKZ1 510 aaKnown RBP7.76□□□□□ -1.17
SKP1-213ENST00000524288 SPO11Q9Y5K1 396 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 ATP23Q9Y6H3 246 aa7.76□□□□□ -1.17
SKP1-213ENST00000524288 GRIN1Q05586 938 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 PCBP2Q15366 365 aaKnown RBP eCLIP7.75□□□□□ -1.17
SKP1-213ENST00000524288 TERF2Q15554 542 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 FIGNQ5HY92 759 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 KCTD1Q719H9 257 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 PASD1Q8IV76 773 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 KRTAP4-11Q9BYQ6 195 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 NGRNQ9NPE2 291 aaKnown RBP7.75□□□□□ -1.17
SKP1-213ENST00000524288 USP40Q9NVE5 1235 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 RIC8BQ9NVN3 520 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 IP6K2Q9UHH9 426 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 WASHC2AQ641Q2 1341 aa7.75□□□□□ -1.17
SKP1-213ENST00000524288 SMAD3P84022 425 aaKnown RBP7.74□□□□□ -1.17
SKP1-213ENST00000524288 KLF1Q13351 362 aaPredicted RBP7.74□□□□□ -1.17
SKP1-213ENST00000524288 TUSC3Q13454 348 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 SMAD2Q15796 467 aaKnown RBP7.74□□□□□ -1.17
SKP1-213ENST00000524288 ESRP1Q6NXG1 681 aaKnown RBP7.74□□□□□ -1.17
SKP1-213ENST00000524288 PGM2L1Q6PCE3 622 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 TTLL7Q6ZT98 887 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 C14orf80Q86SX3 495 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 CHPFQ8IZ52 775 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 FUBP3Q96I24 572 aaKnown RBP eCLIP7.74□□□□□ -1.17
SKP1-213ENST00000524288 SPATA25Q9BR10 227 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 ADAM7Q9H2U9 754 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 MYOTQ9UBF9 498 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 ZNF180Q9UJW8 692 aa7.74□□□□□ -1.17
SKP1-213ENST00000524288 LUC7L2Q9Y383 392 aaKnown RBP7.74□□□□□ -1.17
SKP1-213ENST00000524288 NOC2LQ9Y3T9 749 aaKnown RBP7.74□□□□□ -1.17
SKP1-213ENST00000524288 A0A1B0GTL3 188 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 PRAMEF25A6NGN4 478 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 FAM90A27PA6NNH2 459 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 PRPF3O43395 683 aaKnown RBP7.73□□□□□ -1.17
SKP1-213ENST00000524288 H2AFYO75367 372 aaKnown RBP7.73□□□□□ -1.17
SKP1-213ENST00000524288 CCND1P24385 295 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 NT5DC1Q5TFE4 455 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 BTBD8Q5XKL5 378 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 ZC3H18Q86VM9 953 aaKnown RBP7.73□□□□□ -1.17
SKP1-213ENST00000524288 TGFBRAP1Q8WUH2 860 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 RTF1Q92541 710 aaKnown RBP7.73□□□□□ -1.17
SKP1-213ENST00000524288 ERCC4Q92889 916 aaPredicted RBP7.73□□□□□ -1.17
SKP1-213ENST00000524288 ZBTB8AQ96BR9 441 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 NOX5Q96PH1 765 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 MENTQ9BUN1 341 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 CDH19Q9H159 772 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 ZMAT4Q9H898 229 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 SLC52A1Q9NWF4 448 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 PALD1Q9ULE6 856 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 PCDHB4Q9Y5E5 795 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 B3GALT1Q9Y5Z6 326 aa7.73□□□□□ -1.17
SKP1-213ENST00000524288 GOLGA8AA7E2F4 631 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 GOLGA8BA8MQT2 603 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 HGSO14964 777 aaPredicted RBP7.72□□□□□ -1.17
SKP1-213ENST00000524288 SGSM2O43147 1006 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 KDM1AO60341 852 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 CLASP2O75122 1294 aaKnown RBP7.72□□□□□ -1.17
SKP1-213ENST00000524288 C8BP07358 591 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 PTPN1P18031 435 aaKnown RBP7.72□□□□□ -1.17
SKP1-213ENST00000524288 ATF3P18847 181 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 LSP1P33241 339 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 SARSP49591 514 aaKnown RBP7.72□□□□□ -1.17
SKP1-213ENST00000524288 GJA9P57773 515 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 CHRNA2Q15822 529 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 INAVAQ3KP66 663 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 EMC4Q5J8M3 183 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 MILR1Q7Z6M3 343 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.72□□□□□ -1.17
SKP1-213ENST00000524288 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
SKP1-213ENST00000524288 ADGRG2Q8IZP9 1017 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 NLGN4XQ8N0W4 816 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 C1orf162Q8NEQ5 155 aaPredicted RBP7.72□□□□□ -1.17
SKP1-213ENST00000524288 CLEC4DQ8WXI8 215 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 DLG3Q92796 817 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 CCDC136Q96JN2 1154 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms