RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 COBLL1Q53SF7 1204 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 FIGNQ5HY92 759 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 IFIT1BQ5T764 474 aaKnown RBP8.67□□□□□ -1.02
SPIDR-223ENST00000524033 FOCADQ5VW36 1801 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 WWC2Q6AWC2 1192 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 TATDN1Q6P1N9 297 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 DNAH12Q6ZR08 3092 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 CATIPQ7Z7H3 387 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 CCDC82Q8N4S0 544 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 ANKRD20A12PQ8NF67 263 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 GPRC5AQ8NFJ5 357 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 OR8K1Q8NGG5 319 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 U2AF1L4Q8WU68 220 aaKnown RBP8.67□□□□□ -1.02
SPIDR-223ENST00000524033 SDR42E1Q8WUS8 393 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 ROBO3Q96MS0 1386 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 EIF3CQ99613 913 aaKnown RBP8.67□□□□□ -1.02
SPIDR-223ENST00000524033 CCSER1Q9C0I3 900 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 VPS16Q9H269 839 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 BLZF1Q9H2G9 400 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 RASSF4Q9H2L5 321 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 ACBD3Q9H3P7 528 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 SH3GLB2Q9NR46 395 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 TRIM10Q9UDY6 481 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 SERPINB13Q9UIV8 391 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 ZBTB21Q9ULJ3 1066 aa8.67□□□□□ -1.02
SPIDR-223ENST00000524033 FCF1Q9Y324 198 aaKnown RBP8.67□□□□□ -1.02
SPIDR-223ENST00000524033 V9GY48 417 aaPredicted RBP8.67□□□□□ -1.02
SPIDR-223ENST00000524033 BAZ2BQ9UIF8 2168 aaKnown RBP8.66□□□□□ -1.02
SPIDR-223ENST00000524033 MYH10P35580 1976 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 OTOFQ9HC10 1997 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 A0A1W2PQJ5 194 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 POM121CA8CG34 1229 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 ATP1A1P05023 1023 aaKnown RBP8.66□□□□□ -1.02
SPIDR-223ENST00000524033 MCM3P25205 808 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 HNRNPH3P31942 346 aaKnown RBP8.66□□□□□ -1.02
SPIDR-223ENST00000524033 NT5C2P49902 561 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 PMS1P54277 932 aaKnown RBP8.66□□□□□ -1.02
SPIDR-223ENST00000524033 SBK1Q52WX2 424 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 CTR9Q6PD62 1173 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 USP17L2Q6R6M4 530 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 LEKR1Q6ZMV7 388 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 MMGT1Q8N4V1 131 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 RETREG2Q8NC44 543 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 EHBP1Q8NDI1 1231 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 CCDC148Q8NFR7 591 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 LRRC15Q8TF66 581 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 ANKS1AQ92625 1134 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 STAMQ92783 540 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 DEFB118Q96PH6 123 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 MMS19Q96T76 1030 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 NUP88Q99567 741 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-223ENST00000524033 DUSP9Q99956 384 aaKnown RBP8.66□□□□□ -1.02
SPIDR-223ENST00000524033 CRNKL1Q9BZJ0 848 aaKnown RBP8.66□□□□□ -1.02
SPIDR-223ENST00000524033 EHD4Q9H223 541 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 MAGEF1Q9HAY2 307 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 DISC1Q9NRI5 854 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 TOMM22Q9NS69 142 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 KBTBD4Q9NVX7 518 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 RBPJLQ9UBG7 517 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 MORF4L1Q9UBU8 362 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 GJD2Q9UKL4 321 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 A0A0C4DFX4 3053 aa8.66□□□□□ -1.02
SPIDR-223ENST00000524033 CYP2D7A0A087X1C5 515 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 hCG_1642624A0A1W2PR95 340 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 TRIM49BA6NDI0 452 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 AGPSO00116 658 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 COBLO75128 1261 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 PPFIA4O75335 1185 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 CLSTN1O94985 981 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 CALML3P27482 149 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 TNFRSF8P28908 595 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 PRPHP41219 470 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 NOP2P46087 812 aaKnown RBP8.65□□□□□ -1.02
SPIDR-223ENST00000524033 DNM2P50570 870 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 CORO7P57737 925 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 ABCB5Q2M3G0 1257 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 SLC35G1Q2M3R5 365 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 MAP9Q49MG5 647 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 RCSD1Q6JBY9 416 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 FOXR1Q6PIV2 292 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 PIK3AP1Q6ZUJ8 805 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 UBE2Q1Q7Z7E8 422 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 CCDC170Q8IYT3 715 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 GIMAP8Q8ND71 665 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-223ENST00000524033 AFAP1L1Q8TED9 768 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 AENQ8WTP8 325 aaKnown RBP8.65□□□□□ -1.02
SPIDR-223ENST00000524033 COG1Q8WTW3 980 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 GLMNQ92990 594 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 JAKMIP2Q96AA8 810 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 ERGIC2Q96RQ1 377 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 HTATIP2Q9BUP3 242 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 TXNRD2Q9NNW7 524 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 MCM9Q9NXL9 1143 aa8.65□□□□□ -1.02
SPIDR-223ENST00000524033 LAMA2P24043 3122 aaKnown RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 MINDY4BA8MYZ0 360 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 USP17L15C9J2P7 530 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 USP17L13C9JLJ4 530 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 USP17L11C9JVI0 530 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 USP17L18D6R9N7 530 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms