RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 PTPN22Q9Y2R2 807 aa6.16□□□□□ -1.42
NSMCE2-211ENST00000523549 ZNF888P0CJ79 500 aaPredicted RBP6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 SPIRE1Q08AE8 756 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 HSP90AA2PQ14568 343 aaPredicted RBP6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 KIZQ2M2Z5 673 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 HS1BP3Q53T59 392 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 AGBL4Q5VU57 503 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 Q6ZSN1 163 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 DEFB132Q7Z7B7 95 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 TAX1BP1Q86VP1 789 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 NEIL1Q96FI4 390 aaPredicted RBP6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 ZFYVE21Q9BQ24 234 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 DSEQ9UL01 958 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 NUB1Q9Y5A7 615 aa6.15□□□□□ -1.42
NSMCE2-211ENST00000523549 NPHP4O75161 1426 aaPredicted RBP6.15□□□□□ -1.43
NSMCE2-211ENST00000523549 A2ML1A8K2U0 1454 aa6.15□□□□□ -1.43
NSMCE2-211ENST00000523549 DEPDC5O75140 1603 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 ZC3H13Q5T200 1668 aaKnown RBP6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 H0Y858 1186 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 FGFR1P11362 822 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 GNAT1P11488 350 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 PRELPP51888 382 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 RBM6P78332 1123 aaKnown RBP6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 KCTD1Q719H9 257 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 CELF2-AS1Q8N7Q2 184 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 SH3RF2Q8TEC5 729 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 OSBP2Q969R2 916 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 LRRC37BQ96QE4 947 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 KCNJ15Q99712 375 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 SPATA31A6Q5VVP1 1343 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 SCAPERQ9BY12 1400 aa6.14□□□□□ -1.43
NSMCE2-211ENST00000523549 TCRBV5S4A2TA0A5A2 114 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 NPIPB8E9PQR5 432 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 POLD1P28340 1107 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 USP10Q14694 798 aaKnown RBP6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 CRB2Q5IJ48 1285 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 IGFL4Q6B9Z1 124 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 STYK1Q6J9G0 422 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 RNF207Q6ZRF8 634 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 FUKQ8N0W3 1084 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 GIMAP8Q8ND71 665 aaPredicted RBP6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 ADOQ96SZ5 270 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 TACO1Q9BSH4 297 aaKnown RBP6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 CARD11Q9BXL7 1154 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 ARHGEF4Q9NR80 690 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 ZMYM3Q14202 1370 aa6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.13□□□□□ -1.43
NSMCE2-211ENST00000523549 SOD2P04179 222 aa6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 COMTP21964 271 aa6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 ABCC1P33527 1531 aa6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 GPR85P60893 370 aa6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 TOP3AQ13472 1001 aaPredicted RBP6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 MCF2L2Q86YR7 1114 aa6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 IFNL3Q8IZI9 196 aa6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 IFNL2Q8IZJ0 200 aa6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 AARSD1Q9BTE6 412 aaKnown RBP6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 ST7Q9NRC1 585 aa6.12□□□□□ -1.43
NSMCE2-211ENST00000523549 MED14O60244 1454 aa6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 PRODHO43272 600 aa6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 CUTAO60888 179 aa6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 PABPC1P11940 636 aaKnown RBP6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 ERCC5P28715 1186 aaPredicted RBP6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 DBPQ10586 325 aaPredicted RBP6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 DDR2Q16832 855 aa6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 RNF151Q2KHN1 245 aa6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 ZNF341Q9BYN7 854 aa6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 IPPKQ9H8X2 491 aa6.11□□□□□ -1.43
NSMCE2-211ENST00000523549 LRRC9Q6ZRR7 1453 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 FAM47E-STBD1D6RA91 191 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 MATN2O00339 956 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 RAD17O75943 681 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 RAC3P60763 192 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 DUSP8Q13202 625 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 USP39Q53GS9 565 aaKnown RBP6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 MAMDC4Q6UXC1 1216 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 NSMFQ6X4W1 530 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 HNRNPLLQ8WVV9 542 aaKnown RBP6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 EXTL1Q92935 676 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 SLC39A2Q9NP94 309 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 SLC30A1Q9Y6M5 507 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 BRWD3Q6RI45 1802 aa6.1□□□□□ -1.43
NSMCE2-211ENST00000523549 PLCH2O75038 1416 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 BLMP54132 1417 aaPredicted RBP6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 FGD6Q6ZV73 1430 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 BLACEA4D250 179 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 KLF4O43474 513 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 NARSO43776 548 aaKnown RBP6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 CR2P20023 1033 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 FHL2Q14192 279 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 NRN1LQ496H8 165 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 TINF2Q9BSI4 451 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 CD244Q9BZW8 370 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 OAZ3Q9UMX2 235 aa6.09□□□□□ -1.43
NSMCE2-211ENST00000523549 MAP3K1Q13233 1512 aa6.09□□□□□ -1.44
NSMCE2-211ENST00000523549 SCAF11Q99590 1463 aaKnown RBP6.09□□□□□ -1.44
NSMCE2-211ENST00000523549 KIF14Q15058 1648 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 ESYT3A0FGR9 886 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms