RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 LETM2Q2VYF4 491 aa19.45■□□□□ 0.7
CCNC-213ENST00000523541 TRMT1LQ7Z2T5 733 aaKnown RBP19.45■□□□□ 0.7
CCNC-213ENST00000523541 TRAPPC12Q8WVT3 735 aa19.45■□□□□ 0.7
CCNC-213ENST00000523541 ZBTB10Q96DT7 871 aa19.45■□□□□ 0.7
CCNC-213ENST00000523541 YME1L1Q96TA2 773 aa19.45■□□□□ 0.7
CCNC-213ENST00000523541 KCNMB3Q9NPA1 279 aa19.45■□□□□ 0.7
CCNC-213ENST00000523541 PRDM6Q9NQX0 595 aa19.45■□□□□ 0.7
CCNC-213ENST00000523541 SH2B1Q9NRF2 756 aaPredicted RBP19.45■□□□□ 0.7
CCNC-213ENST00000523541 PTPRSQ13332 1948 aa19.45■□□□□ 0.7
CCNC-213ENST00000523541 ZBTB42B2RXF5 422 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 DKC1O60832 514 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCNC-213ENST00000523541 ARHGEF15O94989 841 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 LARGE1O95461 756 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 TMOD1P28289 359 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 CDC42EP1Q00587 391 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 TMEM62Q0P6H9 643 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 PIK3AP1Q6ZUJ8 805 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 MIER3Q7Z3K6 550 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 KIAA0319LQ8IZA0 1049 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 COL25A1Q9BXS0 654 aaPredicted RBP19.44■□□□□ 0.7
CCNC-213ENST00000523541 UNC45AQ9H3U1 944 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 RNF216Q9NWF9 866 aaPredicted RBP19.44■□□□□ 0.7
CCNC-213ENST00000523541 LMCD1Q9NZU5 365 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 THEGQ9P2T0 379 aa19.44■□□□□ 0.7
CCNC-213ENST00000523541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.43■□□□□ 0.7
CCNC-213ENST00000523541 ENPP3O14638 875 aa19.43■□□□□ 0.7
CCNC-213ENST00000523541 MMP1P03956 469 aa19.43■□□□□ 0.7
CCNC-213ENST00000523541 OATP04181 439 aa19.43■□□□□ 0.7
CCNC-213ENST00000523541 PPP2R5CQ13362 524 aa19.43■□□□□ 0.7
CCNC-213ENST00000523541 SLFN12Q8IYM2 578 aa19.43■□□□□ 0.7
CCNC-213ENST00000523541 SP7Q8TDD2 431 aaPredicted RBP19.43■□□□□ 0.7
CCNC-213ENST00000523541 SAMD11Q96NU1 681 aa19.43■□□□□ 0.7
CCNC-213ENST00000523541 TGS1Q96RS0 853 aaKnown RBP19.43■□□□□ 0.7
CCNC-213ENST00000523541 OSBPL7Q9BZF2 842 aa19.43■□□□□ 0.7
CCNC-213ENST00000523541 UPF2Q9HAU5 1272 aaKnown RBP19.43■□□□□ 0.7
CCNC-213ENST00000523541 EPOPA6NHQ4 379 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 CCNT1O60563 726 aaKnown RBP19.42■□□□□ 0.7
CCNC-213ENST00000523541 BAG4O95429 457 aaKnown RBP19.42■□□□□ 0.7
CCNC-213ENST00000523541 C22orf31O95567 290 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 ERVK-21P61565 698 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 HMGN5P82970 282 aaKnown RBP19.42■□□□□ 0.7
CCNC-213ENST00000523541 XKR3Q5GH77 459 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 SPRED2Q7Z698 418 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 OXER1Q8TDS5 423 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 GDPD5Q8WTR4 605 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 SYMPKQ92797 1274 aaKnown RBP19.42■□□□□ 0.7
CCNC-213ENST00000523541 TNFRSF25Q93038 417 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 KIF2CQ99661 725 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 NIFKQ9BYG3 293 aaKnown RBP19.42■□□□□ 0.7
CCNC-213ENST00000523541 GINS2Q9Y248 185 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 TRANK1O15050 2925 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 MICAL3Q7RTP6 2002 aa19.42■□□□□ 0.7
CCNC-213ENST00000523541 LINC01553A4QN01 128 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 ZNF862O60290 1169 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 CRYBB1P53674 252 aaPredicted RBP19.41■□□□□ 0.7
CCNC-213ENST00000523541 GRB10Q13322 594 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 RABEP1Q15276 862 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 SAFBQ15424 915 aaKnown RBP eCLIP19.41■□□□□ 0.7
CCNC-213ENST00000523541 EXOC8Q8IYI6 725 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 GJB4Q9NTQ9 266 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 PADI3Q9ULW8 664 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 PPME1Q9Y570 386 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 MTCH2Q9Y6C9 303 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 PRUNE2Q8WUY3 3088 aa19.41■□□□□ 0.7
CCNC-213ENST00000523541 GPR182O15218 404 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 CHMP2AO43633 222 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 SLC37A4O43826 429 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 MARCH6O60337 910 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 IBSPP21815 317 aaPredicted RBP19.4■□□□□ 0.7
CCNC-213ENST00000523541 PSMC5P62195 406 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 PRKCEQ02156 737 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 PAK2Q13177 524 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 TJAP1Q5JTD0 557 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 KRT40Q6A162 431 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 METTL13Q8N6R0 699 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 FBXO22Q8NEZ5 403 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 MAP7D2Q96T17 732 aa19.4■□□□□ 0.7
CCNC-213ENST00000523541 AGO3Q9H9G7 860 aaKnown RBP19.4■□□□□ 0.7
CCNC-213ENST00000523541 JAK2O60674 1132 aa19.39■□□□□ 0.69
CCNC-213ENST00000523541 P4HBP07237 508 aaKnown RBP19.39■□□□□ 0.69
CCNC-213ENST00000523541 CD52P31358 61 aa19.39■□□□□ 0.69
CCNC-213ENST00000523541 NR5A1Q13285 461 aa19.39■□□□□ 0.69
CCNC-213ENST00000523541 TARBP2Q15633 366 aaKnown RBP19.39■□□□□ 0.69
CCNC-213ENST00000523541 EFCAB12Q6NXP0 572 aa19.39■□□□□ 0.69
CCNC-213ENST00000523541 DIS3L2Q8IYB7 885 aaKnown RBP19.39■□□□□ 0.69
CCNC-213ENST00000523541 LINC01465Q8N7H1 131 aa19.39■□□□□ 0.69
CCNC-213ENST00000523541 ATXN2LQ8WWM7 1075 aaKnown RBP19.39■□□□□ 0.69
CCNC-213ENST00000523541 JPH2Q9BR39 696 aaPredicted RBP19.39■□□□□ 0.69
CCNC-213ENST00000523541 BTBD18B2RXH4 712 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 ST18O60284 1047 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 RPS6KA5O75582 802 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 STAG3L1P0CL83 205 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 QARSP47897 775 aaKnown RBP19.38■□□□□ 0.69
CCNC-213ENST00000523541 DNM2P50570 870 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 MRPS5P82675 430 aaKnown RBP19.38■□□□□ 0.69
CCNC-213ENST00000523541 TBC1D8BQ0IIM8 1120 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 EPHA7Q15375 998 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 HAS1Q92839 578 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 GJA10Q969M2 543 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 C17orf80Q9BSJ5 609 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms