RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 COL9A3Q14050 684 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 GRIK5Q16478 980 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 HADHQ16836 314 aaKnown RBP14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 MAGOHBQ96A72 148 aaKnown RBP14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 SAAL1Q96ER3 474 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 FAM213AQ9BRX8 229 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 JRKLQ9Y4A0 524 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 FMN2Q9NZ56 1722 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 ESYT2A0FGR8 921 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 SMARCA1P28370 1054 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 SF3A3Q12874 501 aaKnown RBP eCLIP14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 BSPRYQ5W0U4 402 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 ZNF302Q9NR11 478 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 SYNJ2BP-COX16A0A087WUM0 186 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 CAPN9O14815 690 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 ZSCAN20P17040 1043 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 RIC1Q4ADV7 1423 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 COX16Q9P0S2 106 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 CEP72Q9P209 647 aa14.17□□□□□ -0.14
PCDHGB1-201ENST00000523390 MYCP01106 439 aaPredicted RBP14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 CTNNA1P35221 906 aaKnown RBP14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 ADCY8P40145 1251 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 ARL1P40616 181 aaPredicted RBP14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 CXCL9Q07325 125 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 C2orf54Q08AI8 447 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 NEDD9Q14511 834 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 KRT81Q14533 505 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 ZNF394Q53GI3 561 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 C7orf31Q8N865 590 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 ATG4CQ96DT6 458 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 KCNQ5Q9NR82 932 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 SEL1LQ9UBV2 794 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 HACL1Q9UJ83 578 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 NDUFAB1O14561 156 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 CLDN3O15551 220 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 SLC37A4O43826 429 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 CEP85LQ5SZL2 805 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 HAUS6Q7Z4H7 955 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 EXOC8Q8IYI6 725 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 CCDC97Q96F63 343 aaPredicted RBP14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 NACA2Q9H009 215 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 IL17RBQ9NRM6 502 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 NR3C2P08235 984 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 MRPS25P82663 173 aaKnown RBP14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 PPFIA1Q13136 1202 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 FAM149B1Q96BN6 582 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 ZNF148Q9UQR1 794 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 FAM205AQ6ZU69 1335 aa14.16□□□□□ -0.14
PCDHGB1-201ENST00000523390 RHOBTB3O94955 611 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 PKN1Q16512 942 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 PPP2R5EQ16537 467 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 MAPK6Q16659 721 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 NBPF9Q3BBW0 867 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 DENND2CQ68D51 928 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 CAPN12Q6ZSI9 719 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 C7orf25Q9BPX7 421 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 REEP2Q9BRK0 252 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 SLFN12LQ6IEE8 588 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 CASC4Q6P4E1 433 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 ANKS4BQ8N8V4 417 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 RSAD2Q8WXG1 361 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 VPS37BQ9H9H4 285 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 DDX4Q9NQI0 724 aaKnown RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 HEXIM1O94992 359 aaKnown RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 GFPT1Q06210 699 aaPredicted RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 PSPC1Q8WXF1 523 aaKnown RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 RPF1Q9H9Y2 349 aaKnown RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 STIM2Q9P246 746 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 SLC9A2Q9UBY0 812 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 PTPN22Q9Y2R2 807 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 MTMR3Q13615 1198 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 CATSPER4Q7RTX7 472 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 SREK1Q8WXA9 508 aaKnown RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 ZKSCAN4Q969J2 545 aaPredicted RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 FAM167AQ96KS9 214 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 NBPF3Q9H094 633 aa14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 POLR3FQ9H1D9 316 aaPredicted RBP14.15□□□□□ -0.14
PCDHGB1-201ENST00000523390 PGRMC1O00264 195 aaKnown RBP14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 RGL2O15211 777 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 STK10O94804 968 aaKnown RBP14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 HOXA10P31260 410 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 SPOUT1Q5T280 376 aaKnown RBP14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 FBXO38Q6PIJ6 1188 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 JPH1Q9HDC5 661 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 FAM217BQ9NTX9 383 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 SALL1Q9NSC2 1324 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 ABCD1P33897 745 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 CCDC14Q49A88 953 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 CCDC121Q6ZUS5 278 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 EPB41L5Q9HCM4 733 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 TUFT1Q9NNX1 390 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 SAMD15Q9P1V8 674 aa14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 HGSO14964 777 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 XPOTO43592 962 aaKnown RBP14.14□□□□□ -0.15
PCDHGB1-201ENST00000523390 KRT15P19012 456 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms