RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 PRPF38AQ8NAV1 312 aaKnown RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 CHST13Q8NET6 341 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 SECISBP2LQ93073 1101 aaKnown RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 C2orf49Q9BVC5 232 aaPredicted RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 IFIH1Q9BYX4 1025 aaKnown RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 WDR11Q9BZH6 1224 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 USP44Q9H0E7 712 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 LMAN2LQ9H0V9 348 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 KANSL2Q9H9L4 492 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 PDGFCQ9NRA1 345 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 SMC4Q9NTJ3 1288 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 DNAJB12Q9NXW2 375 aaKnown RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 NCDNQ9UBB6 729 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 ZNF214Q9UL59 606 aaPredicted RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 SLC6A14Q9UN76 642 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 Q9Y3F1 56 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 RWDD3Q9Y3V2 267 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 USP15Q9Y4E8 981 aaPredicted RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 RIPK3Q9Y572 518 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 ATAD5Q96QE3 1844 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 MYO15AQ9UKN7 3530 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 ASTN1O14525 1302 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 PTPRCP08575 1304 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 EMSYQ7Z589 1322 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 DNAJC25-GNG10A0A024R161 153 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 LOC730098B7Z3J9 87 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 CTAGE5O15320 804 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 LINC01565O15544 149 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 TBX10O75333 385 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 ALAS1P13196 640 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 AKR1B1P15121 316 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 PTGS1P23219 599 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 ARID4AP29374 1257 aaPredicted RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 LTBRP36941 435 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 NRIP1P48552 1158 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 RRP1P56182 461 aaKnown RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 PSMA6P60900 246 aaKnown RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 PPP2R5BQ15173 497 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 ANGPT1Q15389 498 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 KIAA1755Q5JYT7 1200 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 PSAPL1Q6NUJ1 521 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 NSMFQ6X4W1 530 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.52□□□□□ -1.692e-13■■■■■ 32.9
NPM1-210ENST00000523339 BTLAQ7Z6A9 289 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 UBALD2Q8IYN6 164 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 FMR1NBQ8N0W7 255 aaPredicted RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 TMEM105Q8N8V8 129 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 FAM133AQ8N9E0 248 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 KREMEN2Q8NCW0 462 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 RUBCNQ92622 972 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 TP53INP1Q96A56 240 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 IL17RAQ96F46 866 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 ASIC4Q96FT7 647 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 CCDC17Q96LX7 622 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 NUP88Q99567 741 aaPredicted RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 SEMA4AQ9H3S1 761 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 JPH1Q9HDC5 661 aaPredicted RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 VTA1Q9NP79 307 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 RNF146Q9NTX7 359 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 ZFATQ9P243 1243 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 ADD3Q9UEY8 706 aaKnown RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 FBXL21Q9UKT6 434 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 BARX2Q9UMQ3 279 aaPredicted RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 GNEQ9Y223 722 aaKnown RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 NR2E1Q9Y466 385 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 GPC6Q9Y625 555 aaPredicted RBP4.52□□□□□ -1.69
NPM1-210ENST00000523339 MYH13Q9UKX3 1938 aa4.52□□□□□ -1.69
NPM1-210ENST00000523339 RIF1Q5UIP0 2472 aaKnown RBP4.51□□□□□ -1.69
NPM1-210ENST00000523339 B4DLN1 442 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 GRM6O15303 877 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 RB1P06400 928 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 CKBP12277 381 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 IBSPP21815 317 aaPredicted RBP4.51□□□□□ -1.69
NPM1-210ENST00000523339 TARSP26639 723 aaKnown RBP4.51□□□□□ -1.69
NPM1-210ENST00000523339 CA8P35219 290 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 GTF2F1P35269 517 aaKnown RBP eCLIP4.51□□□□□ -1.692e-28■■■■■ 79.1
NPM1-210ENST00000523339 THPOP40225 353 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 ZAP70P43403 619 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 MRPL12P52815 198 aaKnown RBP4.51□□□□□ -1.69
NPM1-210ENST00000523339 NKX3-2P78367 333 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 BTG3Q14201 252 aaPredicted RBP4.51□□□□□ -1.69
NPM1-210ENST00000523339 DUSP28Q4G0W2 176 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 SPOUT1Q5T280 376 aaKnown RBP4.51□□□□□ -1.69
NPM1-210ENST00000523339 CHST3Q7LGC8 479 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 PLEKHM2Q8IWE5 1019 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 TMEM87AQ8NBN3 555 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 SEPT8Q92599 483 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 CHMP4CQ96CF2 233 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 VWCEQ96DN2 955 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 DYNLL2Q96FJ2 89 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 NEK1Q96PY6 1258 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 NACC1Q96RE7 527 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 ALG1Q9BT22 464 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 APOL5Q9BWW9 433 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 BCL11AQ9H165 835 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 TLE6Q9H808 572 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 MKNK2Q9HBH9 465 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 ALG13Q9NP73 1137 aaKnown RBP4.51□□□□□ -1.69
NPM1-210ENST00000523339 COPRSQ9NQ92 184 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 USP18Q9UMW8 372 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms