RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 LMO3Q8TAP4 145 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 WDR66Q8TBY9 1149 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 SENP7Q9BQF6 1050 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 POLLQ9UGP5 575 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 CNOT7Q9UIV1 285 aaKnown RBP11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 FBXO9Q9UK97 447 aaPredicted RBP11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 OPA1O60313 960 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 PLA2G6O60733 806 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 PDHBP11177 359 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 FCER1AP12319 257 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 RFX1P22670 979 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 MRPL12P52815 198 aaKnown RBP11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 GSTO1P78417 241 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 ACTN3Q08043 901 aaPredicted RBP11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 CLUL1Q15846 466 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 GALNTL6Q49A17 601 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 SMCR8Q8TEV9 937 aaPredicted RBP11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 PGM2Q96G03 612 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 MKNK1Q9BUB5 465 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 NEU2Q9Y3R4 380 aa11.4□□□□□ -0.58
ERGIC1-211ENST00000523215 RBM47A0AV96 593 aaKnown RBP11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 CCDC188H7C350 402 aa11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 GLI1P08151 1106 aa11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 C16orf87Q6PH81 154 aa11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 IQCF2Q8IXL9 164 aa11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 CEP95Q96GE4 821 aa11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 ST6GALNAC4Q9H4F1 302 aa11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 CD209Q9NNX6 404 aa11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 CCNL1Q9UK58 526 aaPredicted RBP11.4□□□□□ -0.59
ERGIC1-211ENST00000523215 GSTA1P08263 222 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 BTDP43251 543 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 NONOQ15233 471 aaKnown RBP eCLIP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 KIAA0753Q2KHM9 967 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 ATP6V1G3Q96LB4 118 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 PLIN2Q99541 437 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 GLT8D2Q9H1C3 349 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 LRRC53A6NM62 1247 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 TMCO5BA8MYB1 307 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 KLRF2D3W0D1 207 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 ZNF185O15231 689 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 SLC37A4O43826 429 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 MGRN1O60291 552 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 TSPY3P0CV98 308 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 TSPY8P0CW00 308 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 MAPTP10636 758 aaKnown RBP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 CTNNA2P26232 953 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 SLC18A1P54219 525 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 HEATR3Q7Z4Q2 680 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 CSGALNACT2Q8N6G5 542 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 CASKIN2Q8WXE0 1202 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 HPS3Q969F9 1004 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 RRP36Q96EU6 259 aaKnown RBP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 NUP88Q99567 741 aaPredicted RBP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 RBM12Q9NTZ6 932 aaKnown RBP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 CHCHD3Q9NX63 227 aaKnown RBP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 TMEM260Q9NX78 707 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 LRWD1Q9UFC0 647 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 VAV3Q9UKW4 847 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 ZPR1O75312 459 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 PLEKP08567 350 aaPredicted RBP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 GNA11P29992 359 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 KIF22Q14807 665 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 RBM46Q8TBY0 533 aaKnown RBP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 TAF4BQ92750 862 aa11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 RTCBQ9Y3I0 505 aaKnown RBP11.39□□□□□ -0.59
ERGIC1-211ENST00000523215 MEFVO15553 781 aaPredicted RBP11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 SCFD1Q8WVM8 642 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 LARP4BQ92615 738 aaKnown RBP11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 COL4A3BPQ9Y5P4 624 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 USP17L5A8MUK1 530 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 TACC1O75410 805 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 RASA2Q15283 850 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 C11orf63Q6NUN7 778 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 FAM76AQ8TAV0 307 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 NEK9Q8TD19 979 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 POLR3CQ9BUI4 534 aaPredicted RBP11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 TAF1DQ9H5J8 278 aaPredicted RBP11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 DDX4Q9NQI0 724 aaKnown RBP11.38□□□□□ -0.59
ERGIC1-211ENST00000523215 GYS1P13807 737 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 SIX1Q15475 284 aaPredicted RBP11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 EZH2Q15910 746 aaKnown RBP11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 CLEC16AQ2KHT3 1053 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 DUPD1Q68J44 220 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 TATDN1Q6P1N9 297 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 KCNK18Q7Z418 384 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 GMCL1P1Q8NEA9 526 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 EYA3Q99504 573 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 CAPS2Q9BXY5 557 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 MAP3K20Q9NYL2 800 aaKnown RBP11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 KCND2Q9NZV8 630 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 PCYOX1Q9UHG3 505 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 KLF15Q9UIH9 416 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 PDCD11Q14690 1871 aaKnown RBP11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 ASTN1O14525 1302 aa11.37□□□□□ -0.59
ERGIC1-211ENST00000523215 PDXKO00764 312 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms