RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 AGXT2Q9BYV1 514 aa11.6□□□□□ -0.55
CTNNA1-235ENST00000522730 LRFN2Q9ULH4 789 aa11.6□□□□□ -0.55
CTNNA1-235ENST00000522730 PCDHA10Q9Y5I2 948 aa11.6□□□□□ -0.55
CTNNA1-235ENST00000522730 IGKV6D-21A0A0A0MT36 114 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 RPS6KA5O75582 802 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 RPLP2P05387 115 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 BMPR1AP36894 532 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 SETQ01105 290 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 KIZQ2M2Z5 673 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 FBXL16Q8N461 479 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 BANK1Q8NDB2 785 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 CRYGNQ8WXF5 182 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 LINC01599Q8WXQ3 324 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 ZNF668Q96K58 619 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 FTHL17Q9BXU8 183 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 UBE2ZQ9H832 354 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 NOC2LQ9Y3T9 749 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 MICAL3Q7RTP6 2002 aa11.59□□□□□ -0.55
CTNNA1-235ENST00000522730 MUC3AQ02505 3323 aa11.58□□□□□ -0.55
CTNNA1-235ENST00000522730 DENND3A2RUS2 1198 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 H3BQ06 376 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 GRM6O15303 877 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 MSH4O15457 936 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 GAS7O60861 476 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 VTNP04004 478 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 GATMP50440 423 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 TCEAL5Q5H9L2 206 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 SPOUT1Q5T280 376 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 CPLX2Q6PUV4 134 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 ZNF274Q96GC6 653 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 AIFM3Q96NN9 605 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 TMX1Q9H3N1 280 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 IGFLR1Q9H665 355 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 ALG13Q9NP73 1137 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 DISC1Q9NRI5 854 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 NRBP2Q9NSY0 501 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 PCDHA4Q9UN74 947 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 ST3GAL5Q9UNP4 418 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 KCNJ14Q9UNX9 436 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 PCDHB7Q9Y5E2 793 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 ADGRA3Q8IWK6 1321 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 IGSF9BQ9UPX0 1349 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 MYO7AQ13402 2215 aa11.58□□□□□ -0.56
CTNNA1-235ENST00000522730 BRWD1Q9NSI6 2320 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 WDR64B1ANS9 1081 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 ZBTB42B2RXF5 422 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 DGKIO75912 1065 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 DEXIO95424 95 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 STAG3L1P0CL83 205 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 CIITAP33076 1130 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 USP11P51784 963 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 CLCN3P51790 818 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 EVCP57679 992 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 LRCH2Q5VUJ6 765 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 EFCAB12Q6NXP0 572 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 NPAS4Q8IUM7 802 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 SMAP1Q8IYB5 467 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 BLIDQ8IZY5 108 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 LRRC71Q8N4P6 559 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 OSMRQ99650 979 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 ADAM2Q99965 735 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 C11orf84Q9BUA3 381 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 SLKQ9H2G2 1235 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 SH3GLB2Q9NR46 395 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 AKT3Q9Y243 479 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 MRPL42Q9Y6G3 142 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 SQORQ9Y6N5 450 aa11.57□□□□□ -0.56
CTNNA1-235ENST00000522730 COL1A2P08123 1366 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 EDIL3O43854 480 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 MGEA5O60502 916 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 TDP2O95551 362 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 C22orf31O95567 290 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 RB1P06400 928 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 FXR2P51116 673 aaKnown RBP eCLIP11.56□□□□□ -0.562e-9■■■□□ 16
CTNNA1-235ENST00000522730 CRYBB1P53674 252 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 NLRP11P59045 1033 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 CLUL1Q15846 466 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 TIGD5Q53EQ6 642 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 PTCRAQ6ISU1 281 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 MIER3Q7Z3K6 550 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 TMEM40Q8WWA1 233 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 LENG9Q96B70 501 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 ZNF689Q96CS4 500 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 SCLT1Q96NL6 688 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 TEKT3Q9BXF9 490 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 TM6SF1Q9BZW5 370 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 UNC45AQ9H3U1 944 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 NSUN3Q9H649 340 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 ERVK-5Q9HDB9 667 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 CLDND1Q9NY35 253 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 RAPGEFL1Q9UHV5 662 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 CEP131Q9UPN4 1083 aa11.56□□□□□ -0.56
CTNNA1-235ENST00000522730 NID2Q14112 1375 aa11.55□□□□□ -0.56
CTNNA1-235ENST00000522730 TBKBP1A7MCY6 615 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms