RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 GUCD1Q96NT3 240 aa20.09■□□□□ 0.81
CLK4-211ENST00000522556 CEP89Q96ST8 783 aa20.09■□□□□ 0.81
CLK4-211ENST00000522556 MTIF3Q9H2K0 278 aaKnown RBP20.09■□□□□ 0.81
CLK4-211ENST00000522556 NKX2-4Q9H2Z4 354 aa20.09■□□□□ 0.81
CLK4-211ENST00000522556 AGO3Q9H9G7 860 aaKnown RBP20.09■□□□□ 0.81
CLK4-211ENST00000522556 MTMR10Q9NXD2 777 aa20.09■□□□□ 0.81
CLK4-211ENST00000522556 SMIM35A0A1B0GVV1 85 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 POTEMA6NI47 508 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 MARCH6O60337 910 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 PARNO95453 639 aaKnown RBP20.08■□□□□ 0.81
CLK4-211ENST00000522556 VTNP04004 478 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 U2AF2P26368 475 aaKnown RBP eCLIP20.08■□□□□ 0.81
CLK4-211ENST00000522556 TXKP42681 527 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 CYP4A11Q02928 519 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 DRP2Q13474 957 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 TARBP2Q15633 366 aaKnown RBP20.08■□□□□ 0.81
CLK4-211ENST00000522556 MTERF2Q49AM1 385 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 FBXO47Q5MNV8 452 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 TTC38Q5R3I4 469 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 ZNF697Q5TEC3 545 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 SPRED2Q7Z698 418 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 LINC01465Q8N7H1 131 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 ZNF579Q8NAF0 562 aaKnown RBP20.08■□□□□ 0.81
CLK4-211ENST00000522556 DYDC2Q96IM9 177 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 ZNF668Q96K58 619 aaPredicted RBP20.08■□□□□ 0.81
CLK4-211ENST00000522556 FAM167AQ96KS9 214 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 SMC3Q9UQE7 1217 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 TRPV2Q9Y5S1 764 aa20.08■□□□□ 0.81
CLK4-211ENST00000522556 ZBTB39O15060 712 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 BAIAP3O94812 1187 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 GNL2Q13823 731 aaKnown RBP20.07■□□□□ 0.8
CLK4-211ENST00000522556 CTTNQ14247 550 aaKnown RBP20.07■□□□□ 0.8
CLK4-211ENST00000522556 ANO5Q75V66 913 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 METTL13Q8N6R0 699 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 TMEM40Q8WWA1 233 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 TIFAQ96CG3 184 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 LXNQ9BS40 222 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 IFIH1Q9BYX4 1025 aaKnown RBP20.07■□□□□ 0.8
CLK4-211ENST00000522556 SEMA6BQ9H3T3 888 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 TTC12Q9H892 705 aaPredicted RBP20.07■□□□□ 0.8
CLK4-211ENST00000522556 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 CHD9Q3L8U1 2897 aa20.07■□□□□ 0.8
CLK4-211ENST00000522556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.06■□□□□ 0.8
CLK4-211ENST00000522556 LCHNA4D1U4 455 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 CD52P31358 61 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 NPEPPSP55786 919 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 PSMC5P62195 406 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 TMEM266Q2M3C6 531 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 MCTP1Q6DN14 999 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 FAM117BQ6P1L5 589 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 RSPH3Q86UC2 560 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 HERC6Q8IVU3 1022 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 SLFN12Q8IYM2 578 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 LINC01599Q8WXQ3 324 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
CLK4-211ENST00000522556 SLC9A7Q96T83 725 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 GINS2Q9Y248 185 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 PCDHB6Q9Y5E3 794 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 CDH23Q9H251 3354 aa20.06■□□□□ 0.8
CLK4-211ENST00000522556 A0A087WWV3 80 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 ABHD14A-ACY1A0A1B0GW23 586 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 DDX11L8A8MPP1 907 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 BAG4O95429 457 aaKnown RBP20.05■□□□□ 0.8
CLK4-211ENST00000522556 KCNJ6P48051 423 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 IKBKEQ14164 716 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 EPHA7Q15375 998 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 XKR3Q5GH77 459 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 EFCAB12Q6NXP0 572 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 C4orf32Q8N8J7 132 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 SEPT8Q92599 483 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 NIFKQ9BYG3 293 aaKnown RBP20.05■□□□□ 0.8
CLK4-211ENST00000522556 CELF4Q9BZC1 486 aaKnown RBP20.05■□□□□ 0.8
CLK4-211ENST00000522556 BMP2KQ9NSY1 1161 aaPredicted RBP20.05■□□□□ 0.8
CLK4-211ENST00000522556 PCDHA12Q9UN75 941 aa20.05■□□□□ 0.8
CLK4-211ENST00000522556 COL4A6Q14031 1691 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 CA3P07451 260 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 OR52Z1P0C646 297 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 QARSP47897 775 aaKnown RBP20.04■□□□□ 0.8
CLK4-211ENST00000522556 GRIN2CQ14957 1233 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 KIZQ2M2Z5 673 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 OSMRQ99650 979 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 EIF2AK1Q9BQI3 630 aaKnown RBP20.04■□□□□ 0.8
CLK4-211ENST00000522556 ZNF576Q9H609 170 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 NRBP2Q9NSY0 501 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 CEP131Q9UPN4 1083 aa20.04■□□□□ 0.8
CLK4-211ENST00000522556 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.04■□□□□ 0.8
CLK4-211ENST00000522556 GPR32O75388 356 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 P4HBP07237 508 aaKnown RBP20.03■□□□□ 0.8
CLK4-211ENST00000522556 TBC1D8BQ0IIM8 1120 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 IER5Q5VY09 327 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 TSHZ1Q6ZSZ6 1077 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 MYOCDQ8IZQ8 938 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 TMX1Q9H3N1 280 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 SUGCTQ9HAC7 445 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 NOC2LQ9Y3T9 749 aaKnown RBP20.03■□□□□ 0.8
CLK4-211ENST00000522556 KIF3AQ9Y496 699 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 PCDHA11Q9Y5I1 949 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 CHD7Q9P2D1 2997 aa20.03■□□□□ 0.8
CLK4-211ENST00000522556 COL4A4P53420 1690 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms