RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
PVT1-213ENST00000522414 GDF10P55107 478 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 ADGRE1Q14246 886 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 TTLL4Q14679 1199 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 PWP2Q15269 919 aaKnown RBP9.33□□□□□ -0.92
PVT1-213ENST00000522414 CCDC85BQ15834 202 aaPredicted RBP9.33□□□□□ -0.92
PVT1-213ENST00000522414 ASPRV1Q53RT3 343 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 ARSJQ5FYB0 599 aaPredicted RBP9.33□□□□□ -0.92
PVT1-213ENST00000522414 FBXO11Q86XK2 927 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 RPUSD2Q8IZ73 545 aaKnown RBP9.33□□□□□ -0.92
PVT1-213ENST00000522414 BANK1Q8NDB2 785 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 NSUN6Q8TEA1 469 aaKnown RBP9.33□□□□□ -0.92
PVT1-213ENST00000522414 UBAC1Q9BSL1 405 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 SEZ6LQ9BYH1 1024 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 KRT23Q9C075 422 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 NKX2-4Q9H2Z4 354 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 MSRAQ9UJ68 235 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 USP3Q9Y6I4 520 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 SLC4A7Q9Y6M7 1214 aa9.33□□□□□ -0.92
PVT1-213ENST00000522414 ABCB11O95342 1321 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 BDP1A6H8Y1 2624 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 B4DLN1 442 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 FAM229AH3BQW9 127 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 OPLAHO14841 1288 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 NKRFO15226 690 aaKnown RBP eCLIP9.32□□□□□ -0.92
PVT1-213ENST00000522414 SORBS3O60504 671 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 KPNA6O60684 536 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 CFBP00751 764 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 IQCF3P0C7M6 154 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 EIF2AK2P19525 551 aaKnown RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 IGFBP4P22692 258 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 HOXA13P31271 388 aaPredicted RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 MRPL12P52815 198 aaKnown RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 ARHGAP1Q07960 439 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 COL9A3Q14050 684 aaPredicted RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 SEC23AQ15436 765 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 STXBP2Q15833 593 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 SLC35G1Q2M3R5 365 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 BRDTQ58F21 947 aaPredicted RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 OXLD1Q5BKU9 147 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 ARTNQ5T4W7 220 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 IFIT1BQ5T764 474 aaKnown RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 ARHGEF16Q5VV41 709 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 MCF2L2Q86YR7 1114 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 MPHOSPH6Q99547 160 aaKnown RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 MAD2L2Q9UI95 211 aa9.32□□□□□ -0.92
PVT1-213ENST00000522414 DDX41Q9UJV9 622 aaKnown RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 MRPL11Q9Y3B7 192 aaKnown RBP9.32□□□□□ -0.92
PVT1-213ENST00000522414 BAZ2BQ9UIF8 2168 aaKnown RBP9.31□□□□□ -0.92
PVT1-213ENST00000522414 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
PVT1-213ENST00000522414 RFXAPO00287 272 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 EIF3JO75822 258 aaKnown RBP9.31□□□□□ -0.92
PVT1-213ENST00000522414 GH1P01241 217 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 CYP21A2P08686 494 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 FAM157BP0CG42 384 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 MYCLP12524 364 aaPredicted RBP9.31□□□□□ -0.92
PVT1-213ENST00000522414 CHMLP26374 656 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 SMTNP53814 917 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 PTGISQ16647 500 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 TTC22Q5TAA0 569 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 GDF6Q6KF10 455 aaPredicted RBP9.31□□□□□ -0.92
PVT1-213ENST00000522414 NFRKBQ6P4R8 1299 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 PIBF1Q8WXW3 757 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 KAT2BQ92831 832 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 CTAGE1Q96RT6 745 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 IWS1Q96ST2 819 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 AMNQ9BXJ7 453 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 FTOQ9C0B1 505 aaKnown RBP eCLIP9.31□□□□□ -0.92
PVT1-213ENST00000522414 MAF1Q9H063 256 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 BCAS3Q9H6U6 928 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 CNNM2Q9H8M5 875 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 CERS4Q9HA82 394 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 SLC28A3Q9HAS3 691 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 ZFP64Q9NPA5 681 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 PXMP2Q9NR77 195 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 PCDHA1Q9Y5I3 950 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 SCN10AQ9Y5Y9 1956 aa9.31□□□□□ -0.92
PVT1-213ENST00000522414 IFIT3O14879 490 aaKnown RBP9.3□□□□□ -0.92
PVT1-213ENST00000522414 EFSO43281 561 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 MMP3P08254 477 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 ATP2A2P16615 1042 aaKnown RBP9.3□□□□□ -0.92
PVT1-213ENST00000522414 CASTP20810 708 aaKnown RBP9.3□□□□□ -0.92
PVT1-213ENST00000522414 ZNF200P98182 395 aaPredicted RBP9.3□□□□□ -0.92
PVT1-213ENST00000522414 SP2Q02086 613 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 GPNMBQ14956 572 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 RAB30Q15771 203 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 STOX1Q6ZVD7 989 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 TMCO2Q7Z6W1 182 aaPredicted RBP9.3□□□□□ -0.92
PVT1-213ENST00000522414 HOMER1Q86YM7 354 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 MTMR8Q96EF0 704 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 PIGSQ96S52 555 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 MTIF3Q9H2K0 278 aaKnown RBP9.3□□□□□ -0.92
PVT1-213ENST00000522414 NOD1Q9Y239 953 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 RAD50Q92878 1312 aa9.3□□□□□ -0.92
PVT1-213ENST00000522414 ELOA3CA0A087WX78 387 aaPredicted RBP9.29□□□□□ -0.92
PVT1-213ENST00000522414 ELOA3DA6NLF2 546 aaPredicted RBP9.29□□□□□ -0.92
PVT1-213ENST00000522414 E7EWF7 191 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 ZBTB5O15062 677 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 CYTH3O43739 400 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms