RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 GGPS1O95749 300 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 LGALS2P05162 132 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 NR3C2P08235 984 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 ADRB1P08588 477 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 PDHBP11177 359 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 HOXB8P17481 243 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 EIF2AK2P19525 551 aaKnown RBP10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 PPARAQ07869 468 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 APOBRQ0VD83 1088 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 USH1GQ495M9 461 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 FBXO47Q5MNV8 452 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 PPP1R18Q6NYC8 613 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 SIRT2Q8IXJ6 389 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 LMBR1Q8WVP7 490 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 THAP11Q96EK4 314 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 KIF1BPQ96EK5 621 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 RTP3Q9BQQ7 232 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 SLC6A16Q9GZN6 736 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 KDM4CQ9H3R0 1056 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 AAASQ9NRG9 546 aa10.4□□□□□ -0.74
TRAPPC9-212ENST00000521944 GCN1Q92616 2671 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 OPLAHO14841 1288 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 FGF18O76093 207 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 APPP05067 770 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 SP9P0CG40 484 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 UBA1P22314 1058 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 TGM1P22735 817 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 UBE3AQ05086 875 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 KIAA0319Q5VV43 1072 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 ZSCAN25Q6NSZ9 544 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 TRIM50Q86XT4 487 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 MAML2Q8IZL2 1156 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 SIX5Q8N196 739 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 APPBP2Q92624 585 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 SEC62Q99442 399 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 HINFPQ9BQA5 517 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 PXMP2Q9NR77 195 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 DLGAP2Q9P1A6 1054 aa10.39□□□□□ -0.75
TRAPPC9-212ENST00000521944 KRBA1A5PL33 1030 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 TSPY2A6NKD2 308 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 ANP32CO43423 234 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 SNHG28P0DPA3 235 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 CD52P31358 61 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 CTDSPL2Q05D32 466 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 ACAP1Q15027 740 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 PLPP4Q5VZY2 271 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 NPAS4Q8IUM7 802 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 C12orf76Q8N812 135 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 IL31RAQ8NI17 732 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 TMX1Q9H3N1 280 aa10.38□□□□□ -0.75
TRAPPC9-212ENST00000521944 MAST4O15021 2626 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 RNF113AO15541 343 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 GNAT2P19087 354 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 ARHGAP4P98171 946 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 COL9A3Q14050 684 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 MSS51Q4VC12 460 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 HSP90AB4PQ58FF6 505 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 ARHGEF16Q5VV41 709 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 VSIG10LQ86VR7 867 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 KBTBD3Q8NAB2 608 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 NECTIN4Q96NY8 510 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 TMEM260Q9NX78 707 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 PNMA2Q9UL42 364 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 HCFC2Q9Y5Z7 792 aa10.37□□□□□ -0.75
TRAPPC9-212ENST00000521944 DSPP15924 2871 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 FNDC1Q4ZHG4 1894 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 FSD2A1L4K1 749 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 NARSO43776 548 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 EOMESO95936 686 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 S1PR4O95977 384 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 FGRP09769 529 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 GOLGA8HP0CJ92 632 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 TOP1P11387 765 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 GLULP15104 373 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 ITIH3Q06033 890 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 TDGQ13569 410 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 MARCH8Q5T0T0 291 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 FAM102BQ5T8I3 360 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 PDE12Q6L8Q7 609 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 TSHZ1Q6ZSZ6 1077 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 TDRD5Q8NAT2 981 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 ZBTB10Q96DT7 871 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 USB1Q9BQ65 265 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 PDCD2LQ9BRP1 358 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 UBA5Q9GZZ9 404 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 MAF1Q9H063 256 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 CWH43Q9H720 699 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 KCNK12Q9HB15 430 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 TYW1Q9NV66 732 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 DUSP12Q9UNI6 340 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 USTQ9Y2C2 406 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 PCDHB12Q9Y5F1 795 aa10.36□□□□□ -0.75
TRAPPC9-212ENST00000521944 KAT6AQ92794 2004 aa10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 RANBP6O60518 1105 aaKnown RBP10.35□□□□□ -0.75
TRAPPC9-212ENST00000521944 DCNP07585 359 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms