RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 AGO3Q9H9G7 860 aaKnown RBP12.79□□□□□ -0.36
CSMD1-210ENST00000521646 LY9Q9HBG7 655 aa12.79□□□□□ -0.36
CSMD1-210ENST00000521646 MAP3K20Q9NYL2 800 aaKnown RBP12.79□□□□□ -0.36
CSMD1-210ENST00000521646 EMSYQ7Z589 1322 aa12.79□□□□□ -0.36
CSMD1-210ENST00000521646 TTC3P53804 2025 aa12.79□□□□□ -0.36
CSMD1-210ENST00000521646 DMDP11532 3685 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 LOXHD1Q8IVV2 1947 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 CFAP99D6REC4 459 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 IFIT3O14879 490 aaKnown RBP12.78□□□□□ -0.36
CSMD1-210ENST00000521646 EFCAB14O75071 495 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 TBX10O75333 385 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 CTHP32929 405 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 NT5C2P49902 561 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 WNT7BP56706 349 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 SKOR1P84550 965 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 ARHGAP4P98171 946 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 HYAL1Q12794 435 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 KCNH2Q12809 1159 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 CTC1Q2NKJ3 1217 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 KCNV1Q6PIU1 500 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 SRBD1Q8N5C6 995 aaKnown RBP12.78□□□□□ -0.36
CSMD1-210ENST00000521646 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
CSMD1-210ENST00000521646 YME1L1Q96TA2 773 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 IFIH1Q9BYX4 1025 aaKnown RBP12.78□□□□□ -0.36
CSMD1-210ENST00000521646 KDM4CQ9H3R0 1056 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 CTNNA3Q9UI47 895 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 PCDHGC5Q9Y5F6 944 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 TECTAO75443 2155 aa12.78□□□□□ -0.36
CSMD1-210ENST00000521646 MARK3P27448 753 aa12.77□□□□□ -0.37
CSMD1-210ENST00000521646 GATMP50440 423 aa12.77□□□□□ -0.37
CSMD1-210ENST00000521646 CLUL1Q15846 466 aa12.77□□□□□ -0.37
CSMD1-210ENST00000521646 UBE2SQ16763 222 aa12.77□□□□□ -0.37
CSMD1-210ENST00000521646 ZNF787Q6DD87 383 aa12.77□□□□□ -0.37
CSMD1-210ENST00000521646 SEPT8Q92599 483 aa12.77□□□□□ -0.37
CSMD1-210ENST00000521646 ZNF689Q96CS4 500 aaPredicted RBP12.77□□□□□ -0.37
CSMD1-210ENST00000521646 PABPC5Q96DU9 382 aaKnown RBP12.77□□□□□ -0.37
CSMD1-210ENST00000521646 MBLAC1A4D2B0 266 aaPredicted RBP12.76□□□□□ -0.37
CSMD1-210ENST00000521646 C5orf67F2Z3F1 127 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 HIP1O00291 1037 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 ENPP3O14638 875 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 ADAMTS3O15072 1205 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 SGSM2O43147 1006 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 FIBPO43427 364 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 IRS1P35568 1242 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 TCF7P36402 384 aaPredicted RBP12.76□□□□□ -0.37
CSMD1-210ENST00000521646 WTAPQ15007 396 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 PCNX4Q63HM2 1172 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 LYPD8Q6UX82 237 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 ADGRD2Q7Z7M1 963 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 RPAINQ86UA6 219 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 SAMD3Q8N6K7 520 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 TRAPPC12Q8WVT3 735 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 USP26Q9BXU7 913 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 PLXNA4Q9HCM2 1894 aa12.76□□□□□ -0.37
CSMD1-210ENST00000521646 PRR33A8MZF0 331 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 PIK3CDO00329 1044 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 NOP56O00567 594 aaKnown RBP12.75□□□□□ -0.37
CSMD1-210ENST00000521646 CAND2O75155 1236 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 CTNNB1P35222 781 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 CLK2P49760 499 aaKnown RBP12.75□□□□□ -0.37
CSMD1-210ENST00000521646 RBM10P98175 930 aaKnown RBP12.75□□□□□ -0.37
CSMD1-210ENST00000521646 QPCTQ16769 361 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 FBXO47Q5MNV8 452 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 DNAJB3Q8WWF6 145 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 CLP1Q92989 425 aaKnown RBP12.75□□□□□ -0.37
CSMD1-210ENST00000521646 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 NSUN3Q9H649 340 aaKnown RBP12.75□□□□□ -0.37
CSMD1-210ENST00000521646 ALG13Q9NP73 1137 aaKnown RBP12.75□□□□□ -0.37
CSMD1-210ENST00000521646 CLDND1Q9NY35 253 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 UBIAD1Q9Y5Z9 338 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 CFAP54Q96N23 3096 aa12.75□□□□□ -0.37
CSMD1-210ENST00000521646 KAT6AQ92794 2004 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 CD52P31358 61 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 BMPR1AP36894 532 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 NEDD9Q14511 834 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 GRIK4Q16099 956 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 TUSC1Q2TAM9 212 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 HFE2Q6ZVN8 426 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 ALYREFQ86V81 257 aaKnown RBP12.74□□□□□ -0.37
CSMD1-210ENST00000521646 BAP1Q92560 729 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 MAP4K1Q92918 833 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 IL17RAQ96F46 866 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 PGBD1Q96JS3 809 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 YTHDC1Q96MU7 727 aaKnown RBP12.74□□□□□ -0.37
CSMD1-210ENST00000521646 SENP7Q9BQF6 1050 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 LRRC2Q9BYS8 371 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 TMX1Q9H3N1 280 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 HCN4Q9Y3Q4 1203 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 CDY2AQ9Y6F7 541 aa12.74□□□□□ -0.37
CSMD1-210ENST00000521646 MRPL42Q9Y6G3 142 aaKnown RBP12.74□□□□□ -0.37
CSMD1-210ENST00000521646 NRCAMQ92823 1304 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 SH2B2O14492 632 aaPredicted RBP12.73□□□□□ -0.37
CSMD1-210ENST00000521646 MBTPS2O43462 519 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 MGEA5O60502 916 aa12.73□□□□□ -0.37
CSMD1-210ENST00000521646 LILRB3O75022 631 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms