RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 HERC6Q8IVU3 1022 aa23.22■■□□□ 1.31
TRIM35-203ENST00000521253 KIAA0319LQ8IZA0 1049 aa23.22■■□□□ 1.31
TRIM35-203ENST00000521253 NME8Q8N427 588 aa23.22■■□□□ 1.31
TRIM35-203ENST00000521253 IFIH1Q9BYX4 1025 aaKnown RBP23.22■■□□□ 1.31
TRIM35-203ENST00000521253 STBD1O95210 358 aa23.21■■□□□ 1.31
TRIM35-203ENST00000521253 MYOGP15173 224 aa23.21■■□□□ 1.31
TRIM35-203ENST00000521253 FBXO47Q5MNV8 452 aa23.21■■□□□ 1.31
TRIM35-203ENST00000521253 NCAPH2Q6IBW4 605 aa23.21■■□□□ 1.31
TRIM35-203ENST00000521253 GUCD1Q96NT3 240 aa23.21■■□□□ 1.31
TRIM35-203ENST00000521253 MTMR9Q96QG7 549 aa23.21■■□□□ 1.31
TRIM35-203ENST00000521253 PCDHA11Q9Y5I1 949 aa23.21■■□□□ 1.31
TRIM35-203ENST00000521253 TRPV2Q9Y5S1 764 aa23.21■■□□□ 1.31
TRIM35-203ENST00000521253 CHD7Q9P2D1 2997 aa23.2■■□□□ 1.3
TRIM35-203ENST00000521253 M0QZ92 97 aa23.2■■□□□ 1.3
TRIM35-203ENST00000521253 U2AF2P26368 475 aaKnown RBP eCLIP23.2■■□□□ 1.3
TRIM35-203ENST00000521253 MCM7P33993 719 aa23.2■■□□□ 1.3
TRIM35-203ENST00000521253 PSMC5P62195 406 aa23.2■■□□□ 1.3
TRIM35-203ENST00000521253 XKR3Q5GH77 459 aa23.2■■□□□ 1.3
TRIM35-203ENST00000521253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.2■■□□□ 1.3
TRIM35-203ENST00000521253 TMCO2Q7Z6W1 182 aaPredicted RBP23.2■■□□□ 1.3
TRIM35-203ENST00000521253 METTL13Q8N6R0 699 aa23.2■■□□□ 1.3
TRIM35-203ENST00000521253 CELF4Q9BZC1 486 aaKnown RBP23.2■■□□□ 1.3
TRIM35-203ENST00000521253 TMEM60Q9H2L4 133 aa23.2■■□□□ 1.3
TRIM35-203ENST00000521253 NKX2-4Q9H2Z4 354 aa23.2■■□□□ 1.3
TRIM35-203ENST00000521253 SEPT9Q9UHD8 586 aaPredicted RBP23.2■■□□□ 1.3
TRIM35-203ENST00000521253 MYH9P35579 1960 aaKnown RBP23.2■■□□□ 1.3
TRIM35-203ENST00000521253 TMEM150BA6NC51 233 aa23.19■■□□□ 1.3
TRIM35-203ENST00000521253 MAGEB2O15479 319 aa23.19■■□□□ 1.3
TRIM35-203ENST00000521253 QARSP47897 775 aaKnown RBP23.19■■□□□ 1.3
TRIM35-203ENST00000521253 EPHA7Q15375 998 aa23.19■■□□□ 1.3
TRIM35-203ENST00000521253 TARBP2Q15633 366 aaKnown RBP23.19■■□□□ 1.3
TRIM35-203ENST00000521253 APBB2Q92870 758 aa23.19■■□□□ 1.3
TRIM35-203ENST00000521253 NIFKQ9BYG3 293 aaKnown RBP23.19■■□□□ 1.3
TRIM35-203ENST00000521253 ZNF576Q9H609 170 aa23.19■■□□□ 1.3
TRIM35-203ENST00000521253 TTC12Q9H892 705 aaPredicted RBP23.19■■□□□ 1.3
TRIM35-203ENST00000521253 PCDHA12Q9UN75 941 aa23.19■■□□□ 1.3
TRIM35-203ENST00000521253 SMC3Q9UQE7 1217 aa23.19■■□□□ 1.3
TRIM35-203ENST00000521253 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.19■■□□□ 1.3
TRIM35-203ENST00000521253 COL6A3P12111 3177 aa23.19■■□□□ 1.3
TRIM35-203ENST00000521253 KDM3AQ9Y4C1 1321 aa23.18■■□□□ 1.3
TRIM35-203ENST00000521253 P4HBP07237 508 aaKnown RBP23.18■■□□□ 1.3
TRIM35-203ENST00000521253 TXKP42681 527 aa23.18■■□□□ 1.3
TRIM35-203ENST00000521253 CLCN3P51790 818 aa23.18■■□□□ 1.3
TRIM35-203ENST00000521253 ZNF174Q15697 407 aa23.18■■□□□ 1.3
TRIM35-203ENST00000521253 MTERF2Q49AM1 385 aa23.18■■□□□ 1.3
TRIM35-203ENST00000521253 TSHZ1Q6ZSZ6 1077 aa23.18■■□□□ 1.3
TRIM35-203ENST00000521253 LINC01465Q8N7H1 131 aa23.18■■□□□ 1.3
TRIM35-203ENST00000521253 SH2D3AQ9BRG2 576 aa23.18■■□□□ 1.3
TRIM35-203ENST00000521253 AGO3Q9H9G7 860 aaKnown RBP23.18■■□□□ 1.3
TRIM35-203ENST00000521253 WRAP73Q9P2S5 460 aaPredicted RBP23.18■■□□□ 1.3
TRIM35-203ENST00000521253 DDX11L8A8MPP1 907 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 CD52P31358 61 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 TRAPPC10P48553 1259 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 TBC1D8BQ0IIM8 1120 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 CUL4AQ13619 759 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 TTC38Q5R3I4 469 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 EFCAB12Q6NXP0 572 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 ANO5Q75V66 913 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 LRRC71Q8N4P6 559 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 CEP89Q96ST8 783 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 CDX2Q99626 313 aaPredicted RBP23.17■■□□□ 1.3
TRIM35-203ENST00000521253 LXNQ9BS40 222 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 SLC28A3Q9HAS3 691 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 RGL1Q9NZL6 768 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 NOL7Q9UMY1 257 aaKnown RBP23.17■■□□□ 1.3
TRIM35-203ENST00000521253 GINS2Q9Y248 185 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 SQORQ9Y6N5 450 aa23.17■■□□□ 1.3
TRIM35-203ENST00000521253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.16■■□□□ 1.3
TRIM35-203ENST00000521253 DKC1O60832 514 aaKnown RBP eCLIP23.16■■□□□ 1.3
TRIM35-203ENST00000521253 AMHP03971 560 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 VTNP04004 478 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 CA3P07451 260 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 CYP4A11Q02928 519 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 ORC2Q13416 577 aaPredicted RBP23.16■■□□□ 1.3
TRIM35-203ENST00000521253 NBR1Q14596 966 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 GRIN2CQ14957 1233 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 PLA2G4FQ68DD2 849 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 MYOCDQ8IZQ8 938 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 USP38Q8NB14 1042 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 DYDC2Q96IM9 177 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 PPP1R16BQ96T49 567 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 SUGCTQ9HAC7 445 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 CDHR5Q9HBB8 845 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 SIP14410 1827 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 WDR81Q562E7 1941 aa23.16■■□□□ 1.3
TRIM35-203ENST00000521253 TLL1O43897 1013 aa23.15■■□□□ 1.3
TRIM35-203ENST00000521253 GJB5O95377 273 aa23.15■■□□□ 1.3
TRIM35-203ENST00000521253 TMOD1P28289 359 aa23.15■■□□□ 1.3
TRIM35-203ENST00000521253 TOB1P50616 345 aaPredicted RBP23.15■■□□□ 1.3
TRIM35-203ENST00000521253 CTTNQ14247 550 aaKnown RBP23.15■■□□□ 1.3
TRIM35-203ENST00000521253 KIZQ2M2Z5 673 aa23.15■■□□□ 1.3
TRIM35-203ENST00000521253 PPP2R2DQ66LE6 453 aa23.15■■□□□ 1.3
TRIM35-203ENST00000521253 MCTP1Q6DN14 999 aa23.15■■□□□ 1.3
TRIM35-203ENST00000521253 ZBED2Q9BTP6 218 aa23.15■■□□□ 1.3
TRIM35-203ENST00000521253 AKT3Q9Y243 479 aa23.15■■□□□ 1.3
TRIM35-203ENST00000521253 H3BQV1 296 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 GPR32O75388 356 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 OR52Z1P0C646 297 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 FAM117BQ6P1L5 589 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 C4orf19Q8IY42 314 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms