RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 ATP4AP20648 1035 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 NFX1Q12986 1120 aaKnown RBP17.9■□□□□ 0.46
CLN8-205ENST00000520991 NPAS4Q8IUM7 802 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 KIAA0319LQ8IZA0 1049 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 BLIDQ8IZY5 108 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 METTL13Q8N6R0 699 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 TBCKQ8TEA7 893 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 FAM167AQ96KS9 214 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 CEP131Q9UPN4 1083 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 TCF20Q9UGU0 1960 aaKnown RBP17.9■□□□□ 0.46
CLN8-205ENST00000520991 RALGAPA2Q2PPJ7 1873 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 CHMP2AO43633 222 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 RPS6KA5O75582 802 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 DGKIO75912 1065 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 CDKL5O76039 1030 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 C22orf31O95567 290 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 STAG3L1P0CL83 205 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 IBSPP21815 317 aaPredicted RBP17.89■□□□□ 0.45
CLN8-205ENST00000520991 BMPR1AP36894 532 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 LRCH2Q5VUJ6 765 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 PPP1R16BQ96T49 567 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 RIT2Q99578 217 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 C11orf84Q9BUA3 381 aaPredicted RBP17.89■□□□□ 0.45
CLN8-205ENST00000520991 TEKT3Q9BXF9 490 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 UBE2ZQ9H832 354 aaPredicted RBP17.89■□□□□ 0.45
CLN8-205ENST00000520991 RC3H2Q9HBD1 1191 aaKnown RBP17.89■□□□□ 0.45
CLN8-205ENST00000520991 DISC1Q9NRI5 854 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 LRFN2Q9ULH4 789 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 TTC3P53804 2025 aa17.89■□□□□ 0.45
CLN8-205ENST00000520991 MYH9P35579 1960 aaKnown RBP17.88■□□□□ 0.45
CLN8-205ENST00000520991 EDIL3O43854 480 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 RB1P06400 928 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 SFNP31947 248 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 KIZQ2M2Z5 673 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 ODR4Q5SWX8 454 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 GALNT17Q6IS24 598 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 RTN4RL1Q86UN2 441 aaPredicted RBP17.88■□□□□ 0.45
CLN8-205ENST00000520991 FAM177A1Q8N128 213 aaPredicted RBP17.88■□□□□ 0.45
CLN8-205ENST00000520991 BANK1Q8NDB2 785 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 SLC5A5Q92911 643 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 ZNF689Q96CS4 500 aaPredicted RBP17.88■□□□□ 0.45
CLN8-205ENST00000520991 AIFM3Q96NN9 605 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 SLKQ9H2G2 1235 aaPredicted RBP17.88■□□□□ 0.45
CLN8-205ENST00000520991 TMX1Q9H3N1 280 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 NOC2LQ9Y3T9 749 aaKnown RBP17.88■□□□□ 0.45
CLN8-205ENST00000520991 LOXHD1Q8IVV2 1947 aa17.88■□□□□ 0.45
CLN8-205ENST00000520991 C5orf67F2Z3F1 127 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 MAGEB2O15479 319 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 KCNA5P22460 613 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 JAK3P52333 1124 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 DAGLBQ8NCG7 672 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 CLP1Q92989 425 aaKnown RBP17.87■□□□□ 0.45
CLN8-205ENST00000520991 OSMRQ99650 979 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 UNC45AQ9H3U1 944 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 CDHR5Q9HBB8 845 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 ERVK-5Q9HDB9 667 aa17.87■□□□□ 0.45
CLN8-205ENST00000520991 DENND3A2RUS2 1198 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 GPR182O15218 404 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 TDP2O95551 362 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 VTNP04004 478 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 OATP04181 439 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 LINC00271P0C7V0 271 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 TMOD1P28289 359 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 CRYBB1P53674 252 aaPredicted RBP17.86■□□□□ 0.45
CLN8-205ENST00000520991 PRKCEQ02156 737 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 SCRN1Q12765 414 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 NONOQ15233 471 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLN8-205ENST00000520991 Q4G0T1 1027 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 PAN2Q504Q3 1202 aaKnown RBP17.86■□□□□ 0.45
CLN8-205ENST00000520991 FAM43BQ6ZT52 329 aaPredicted RBP17.86■□□□□ 0.45
CLN8-205ENST00000520991 KRT25Q7Z3Z0 450 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 CMTR2Q8IYT2 770 aaKnown RBP17.86■□□□□ 0.45
CLN8-205ENST00000520991 TMEM40Q8WWA1 233 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 GJA10Q969M2 543 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 MAP7D2Q96T17 732 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 LMAN2LQ9H0V9 348 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 NSUN3Q9H649 340 aaKnown RBP17.86■□□□□ 0.45
CLN8-205ENST00000520991 NRBP2Q9NSY0 501 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 ST3GAL5Q9UNP4 418 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 AKT3Q9Y243 479 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 PCDHB7Q9Y5E2 793 aa17.86■□□□□ 0.45
CLN8-205ENST00000520991 CYP3A7-CYP3A51PA0A087WV96 503 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.85■□□□□ 0.45
CLN8-205ENST00000520991 M0R2N6 131 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 ZNF862O60290 1169 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 XBP1P17861 261 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 CYP3A7P24462 503 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 SARSP49591 514 aaKnown RBP17.85■□□□□ 0.45
CLN8-205ENST00000520991 CLCN3P51790 818 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 ANAPC15P60006 121 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 TCEAL5Q5H9L2 206 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 ERICH6BQ5W0A0 696 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 EP400NLQ6ZTU2 488 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 MIER3Q7Z3K6 550 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 CRIPAKQ8N1N5 446 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 ADAM2Q99965 735 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 PLVAPQ9BX97 442 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 RNF216Q9NWF9 866 aaPredicted RBP17.85■□□□□ 0.45
CLN8-205ENST00000520991 KCNJ14Q9UNX9 436 aa17.85■□□□□ 0.45
CLN8-205ENST00000520991 MRPL42Q9Y6G3 142 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms