RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RINT1Q6NUQ1 792 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 PADI6Q6TGC4 694 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 ANO5Q75V66 913 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 ATP8B4Q8TF62 1192 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 BBXQ8WY36 941 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-208ENST00000520561 LENG1Q96BZ8 264 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-208ENST00000520561 PCYT2Q99447 389 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 FUCA2Q9BTY2 467 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 TIPINQ9BVW5 301 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 ZHX3Q9H4I2 956 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 CYP26B1Q9NR63 512 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 TRPC6Q9Y210 931 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 PPME1Q9Y570 386 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 SYNRGQ9UMZ2 1314 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 TMEM150BA6NC51 233 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 A6NJR5 290 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 ZBTB39O15060 712 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 ZEB2O60315 1214 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 HBP1O60381 514 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 MSCO60682 206 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 DGAT1O75907 488 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 RHOBTB3O94955 611 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 C6orf222P0C671 652 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 HSPA8P11142 646 aaKnown RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 GAP43P17677 238 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 GUCY2CP25092 1073 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 CCND3P30281 292 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 RFC5P40937 340 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 POLGP54098 1239 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 NPEPPSP55786 919 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 CACNB1Q02641 598 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 RAD51AP2Q09MP3 1159 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 COASYQ13057 564 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 MORC3Q14149 939 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 PLCB4Q15147 1175 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 FSCN1Q16658 493 aaKnown RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 MTERF2Q49AM1 385 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 KMT5BQ4FZB7 885 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 MAP3K21Q5TCX8 1036 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 C1orf186Q6ZWK4 172 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 MCPH1Q8NEM0 835 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 DRC1Q96MC2 740 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 REEP2Q9BRK0 252 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 KATNAL1Q9BW62 490 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 NAT10Q9H0A0 1025 aaKnown RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 UPF3AQ9H1J1 476 aaKnown RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 ATP6V0A4Q9HBG4 840 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 XPNPEP3Q9NQH7 507 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 PANK4Q9NVE7 773 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 DDX20Q9UHI6 824 aaKnown RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 ODF2LQ9ULJ1 636 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 COL4A3BPQ9Y5P4 624 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 MYH9P35579 1960 aaKnown RBP9.94□□□□□ -0.82
CSMD1-208ENST00000520561 WDR81Q562E7 1941 aa9.94□□□□□ -0.82
CSMD1-208ENST00000520561 COL1A2P08123 1366 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 NPHP3-ACAD11A0A0J9YXS1 232 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 FRMD3A2A2Y4 597 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 KLRC4O43908 158 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 KPNA6O60684 536 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 HIP1RO75146 1068 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 STBD1O95210 358 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 CAVIN2O95810 425 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 MYL3P08590 195 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 HSPA1AP0DMV8 641 aaKnown RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 HSPA1BP0DMV9 641 aaKnown RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 ATP4AP20648 1035 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 PPP1R2P41236 205 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 CTCFP49711 727 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 GJA9P57773 515 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 STIM1Q13586 685 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 GIT2Q14161 759 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 EMC2Q15006 297 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 DPCR1Q3MIW9 517 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 ANO6Q4KMQ2 910 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 ARSHQ5FYA8 562 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 HERC4Q5GLZ8 1057 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 FAM26FQ5R3K3 315 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 ZNF658Q5TYW1 1059 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 ISM2Q6H9L7 571 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 CTU1Q7Z7A3 348 aaKnown RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 EXOC8Q8IYI6 725 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 MLKLQ8NB16 471 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 SLC7A3Q8WY07 619 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 DNAJC19Q96DA6 116 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 JPH2Q9BR39 696 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 NIFKQ9BYG3 293 aaKnown RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 DNAJC25Q9H1X3 360 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 PARVGQ9HBI0 331 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 HMX1Q9NP08 348 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-208ENST00000520561 SEL1LQ9UBV2 794 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 PTPN22Q9Y2R2 807 aa9.93□□□□□ -0.82
CSMD1-208ENST00000520561 H3BRB1 525 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 GAS2O43903 313 aaKnown RBP9.92□□□□□ -0.82
CSMD1-208ENST00000520561 PGK1P00558 417 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 F2P00734 622 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 BEX3Q00994 111 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 TBC1D8BQ0IIM8 1120 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 PSMD2Q13200 908 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 MFSD10Q14728 455 aa9.92□□□□□ -0.82
CSMD1-208ENST00000520561 SLC9C1Q4G0N8 1177 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms