RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 MAFBQ9Y5Q3 323 aaPredicted RBP9.49□□□□□ -0.89
VAPB-206ENST00000520497 EMSYQ7Z589 1322 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 HTTP42858 3142 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 CENPFP49454 3210 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 SORBS3O60504 671 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 DKC1O60832 514 aaKnown RBP eCLIP9.48□□□□□ -0.89
VAPB-206ENST00000520497 GNRH1P01148 92 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 SSBP05455 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
VAPB-206ENST00000520497 HOXD8P13378 290 aaPredicted RBP9.48□□□□□ -0.89
VAPB-206ENST00000520497 SMPD1P17405 629 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 ATP4AP20648 1035 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 PTGS1P23219 599 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 YWHABP31946 246 aaKnown RBP9.48□□□□□ -0.89
VAPB-206ENST00000520497 TCF7P36402 384 aaPredicted RBP9.48□□□□□ -0.89
VAPB-206ENST00000520497 PRKCEQ02156 737 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 GIT2Q14161 759 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 CT47A1Q5JQC4 288 aaPredicted RBP9.48□□□□□ -0.89
VAPB-206ENST00000520497 GJC2Q5T442 439 aaPredicted RBP9.48□□□□□ -0.89
VAPB-206ENST00000520497 IQSEC1Q6DN90 963 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 ISM2Q6H9L7 571 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 C1orf186Q6ZWK4 172 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 ANO5Q75V66 913 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 PPTC7Q8NI37 304 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 SPATA33Q96N06 139 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 BPIFA3Q9BQP9 254 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 ZNF302Q9NR11 478 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 NRBP1Q9UHY1 535 aa9.48□□□□□ -0.89
VAPB-206ENST00000520497 ZHX1Q9UKY1 873 aaPredicted RBP9.48□□□□□ -0.89
VAPB-206ENST00000520497 GNEQ9Y223 722 aaKnown RBP9.48□□□□□ -0.89
VAPB-206ENST00000520497 NOP56O00567 594 aaKnown RBP9.47□□□□□ -0.89
VAPB-206ENST00000520497 BACH1O14867 736 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 MYCP01106 439 aaPredicted RBP9.47□□□□□ -0.89
VAPB-206ENST00000520497 CYBAP13498 195 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 GUCY2CP25092 1073 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 COASYQ13057 564 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 IQCB1Q15051 598 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 PKN2Q16513 984 aaKnown RBP9.47□□□□□ -0.89
VAPB-206ENST00000520497 COBLL1Q53SF7 1204 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 XKR3Q5GH77 459 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 PRAMEF19Q5SWL8 479 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 ZNF658Q5TYW1 1059 aaPredicted RBP9.47□□□□□ -0.89
VAPB-206ENST00000520497 DYMQ7RTS9 669 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 TRMT44Q8IYL2 757 aaKnown RBP9.47□□□□□ -0.89
VAPB-206ENST00000520497 MLKLQ8NB16 471 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 ERO1AQ96HE7 468 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 REEP2Q9BRK0 252 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 BMP2KQ9NSY1 1161 aaPredicted RBP9.47□□□□□ -0.89
VAPB-206ENST00000520497 EXOC1Q9NV70 894 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 SRRDQ9UH36 339 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 PTPN22Q9Y2R2 807 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 PCDHA2Q9Y5H9 948 aa9.47□□□□□ -0.89
VAPB-206ENST00000520497 NPHP3-ACAD11A0A0J9YXS1 232 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 ARHGEF35A5YM69 484 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 TMEM150BA6NC51 233 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 OATP04181 439 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 MMP3P08254 477 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 HOXD10P28358 340 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 SLC26A2P50443 739 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 STAT5BP51692 787 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 ZNF131P52739 623 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 TNFAIP2Q03169 654 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 STK4Q13043 487 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 MAPK7Q13164 816 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 UTP14CQ5TAP6 766 aaKnown RBP9.46□□□□□ -0.9
VAPB-206ENST00000520497 FAM160B1Q5W0V3 765 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 PLA2G4FQ68DD2 849 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 PADI6Q6TGC4 694 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 OTUD6AQ7L8S5 288 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 PLPPR4Q7Z2D5 763 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 CCDC65Q8IXS2 484 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 SMYD4Q8IYR2 804 aaPredicted RBP9.46□□□□□ -0.9
VAPB-206ENST00000520497 DAW1Q8N136 415 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 KIAA0895Q8NCT3 520 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 TRPV1Q8NER1 839 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 CEP89Q96ST8 783 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 NIFKQ9BYG3 293 aaKnown RBP9.46□□□□□ -0.9
VAPB-206ENST00000520497 PDLIM7Q9NR12 457 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 ODF2LQ9ULJ1 636 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 GDAQ9Y2T3 454 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 Q9Y3F1 56 aa9.46□□□□□ -0.9
VAPB-206ENST00000520497 ANK1P16157 1881 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 TRIP11Q15643 1979 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 A6NJR5 290 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 RSPH10B2B2RC85 870 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 IKBKBO14920 756 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 USO1O60763 962 aaKnown RBP9.45□□□□□ -0.9
VAPB-206ENST00000520497 PPFIA4O75335 1185 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 LGALS2P05162 132 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 PTMAP06454 111 aaKnown RBP9.45□□□□□ -0.9
VAPB-206ENST00000520497 RSPH10BP0C881 870 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 AKR1A1P14550 325 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 IDEP14735 1019 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 EN2P19622 333 aaPredicted RBP9.45□□□□□ -0.9
VAPB-206ENST00000520497 ERCC5P28715 1186 aaPredicted RBP9.45□□□□□ -0.9
VAPB-206ENST00000520497 PPP1R2P41236 205 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 PRCPP42785 496 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms