RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 THAP9Q9H5L6 903 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 RIOX1Q9H6W3 641 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 C11orf16Q9NQ32 467 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 TTF2Q9UNY4 1162 aaKnown RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 TRIM33Q9UPN9 1127 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 KCNMB2Q9Y691 235 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 ABCB11O95342 1321 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 FLT1P17948 1338 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 MYH4Q9Y623 1939 aa5.65□□□□□ -1.5
SDC2-204ENST00000519914 CCDC194A0A1B0GVG4 234 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 F8W735 103 aaPredicted RBP5.65□□□□□ -1.51
SDC2-204ENST00000519914 ADAMTS3O15072 1205 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 EGFRP00533 1210 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 GYPCP04921 128 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 GLB1P16278 677 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 FSTP19883 344 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 GNA11P29992 359 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 CASQ1P31415 396 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 MCM7P33993 719 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 AFMP43652 599 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 CDK8P49336 464 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 ADKP55263 362 aaKnown RBP5.65□□□□□ -1.51
SDC2-204ENST00000519914 CDK17Q00537 523 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 RBL2Q08999 1139 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 BMS1Q14692 1282 aaKnown RBP5.65□□□□□ -1.51
SDC2-204ENST00000519914 KRT31Q15323 416 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 TCP11X2Q5H9J9 407 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 FIGNQ5HY92 759 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 JAKMIP3Q5VZ66 844 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 PRR5LQ6MZQ0 368 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 TTI2Q6NXR4 508 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 RAD9BQ6WBX8 426 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 DTHD1Q6ZMT9 781 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 TOGARAM2Q6ZUX3 1019 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 PTF1AQ7RTS3 328 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 PPFIBP1Q86W92 1011 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 AMIGO3Q86WK7 504 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 HOMER1Q86YM7 354 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 IRF2BP1Q8IU81 584 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 ZNF444Q8N0Y2 327 aaPredicted RBP5.65□□□□□ -1.51
SDC2-204ENST00000519914 KRT222Q8N1A0 295 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 CNBD1Q8NA66 436 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 RETREG2Q8NC44 543 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 ANKRD20A12PQ8NF67 263 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 ZNF507Q8TCN5 953 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 NELFBQ8WX92 580 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 RABGGTAQ92696 567 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 TTYH3Q9C0H2 523 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 SAP130Q9H0E3 1048 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 TMEM60Q9H2L4 133 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 CD209Q9NNX6 404 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 GEMIN8Q9NWZ8 242 aaKnown RBP5.65□□□□□ -1.51
SDC2-204ENST00000519914 SIPA1L1O43166 1804 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 ARFGEF1Q9Y6D6 1849 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 MYH7BA7E2Y1 1941 aa5.65□□□□□ -1.51
SDC2-204ENST00000519914 hCG_1642624A0A1W2PR95 340 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 LGALS16A8MUM7 142 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 KCNJ18B7U540 433 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 LINC01387J3KSC0 135 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 TUBBP07437 444 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 OR52Z1P0C646 297 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 TSPY3P0CV98 308 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 TSPY8P0CW00 308 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 GYS1P13807 737 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 ATP2B1P20020 1258 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 RFC4P35249 363 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 STAT6P42226 847 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 ARHGAP25P42331 645 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 PRCPP42785 496 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 BTDP43251 543 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 USP5P45974 858 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 GPSM2P81274 684 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 GOLGA8FQ08AF8 430 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 GOLGA8DPQ0D2H9 430 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 KCNJ12Q14500 433 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 SETDB1Q15047 1291 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 NONOQ15233 471 aaKnown RBP eCLIP5.64□□□□□ -1.51
SDC2-204ENST00000519914 MEA1Q16626 185 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 ERCC6LQ2NKX8 1250 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 RRAGBQ5VZM2 374 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 TXNDC11Q6PKC3 985 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 CYP26C1Q6V0L0 522 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 ARHGAP27Q6ZUM4 889 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 ZSCAN29Q8IWY8 852 aaPredicted RBP5.64□□□□□ -1.51
SDC2-204ENST00000519914 ETFBKMTQ8IXQ9 262 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 CEP112Q8N8E3 955 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 MSANTD4Q8NCY6 345 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 LRRN4CLQ8ND94 238 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 LRRC15Q8TF66 581 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 HNRNPLLQ8WVV9 542 aaKnown RBP5.64□□□□□ -1.51
SDC2-204ENST00000519914 UBXN4Q92575 508 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 MTMR8Q96EF0 704 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 DYNLL2Q96FJ2 89 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 RBM17Q96I25 401 aaKnown RBP5.64□□□□□ -1.51
SDC2-204ENST00000519914 MTMR9Q96QG7 549 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 WDR24Q96S15 920 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 DNAJC7Q99615 494 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 MRIQ9BWK5 157 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 LACRTQ9GZZ8 138 aa5.64□□□□□ -1.51
SDC2-204ENST00000519914 MRPL44Q9H9J2 332 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms