RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 WDR43Q15061 677 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 FAM26DQ5JW98 314 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 ATAT1Q5SQI0 421 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 KIAA1211LQ6NV74 962 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 TMC5Q6UXY8 1006 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 WWC1Q8IX03 1113 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 APBB2Q92870 758 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 SWAP70Q9UH65 585 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 MYO5AQ9Y4I1 1855 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 TTC3P53804 2025 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 SHISA7A6NL88 538 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 HYAL3O43820 417 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 UQCRFS1P1P0C7P4 283 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 SRGAP2BP0DMP2 458 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 CASTP20810 708 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 RPIAP49247 311 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 NOVA1P51513 510 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 MSS51Q4VC12 460 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 GORABQ5T7V8 394 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 BRICD5Q6PL45 260 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 RASGRP2Q7LDG7 609 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 HNRNPLLQ8WVV9 542 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 CHMP4CQ96CF2 233 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 CCDC17Q96LX7 622 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 DBNDD2Q9BQY9 259 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 RPP25Q9BUL9 199 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 SMOC1Q9H4F8 434 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 AGO3Q9H9G7 860 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 IGSF9Q9P2J2 1179 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 FEM1BQ9UK73 627 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 CTDP1Q9Y5B0 961 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-216ENST00000519489 NOTCH2Q04721 2471 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 APC2O95996 2303 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 FSD2A1L4K1 749 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 C2orf71A6NGG8 1288 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 EIF4E1BA6NMX2 242 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 IDH1O75874 414 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 PBX3P40426 434 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 TKFCQ3LXA3 575 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 AASDHQ4L235 1098 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 C16orf86Q6ZW13 317 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 OTOP3Q7RTS5 596 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 LCORLQ8N3X6 602 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 COLGALT1Q8NBJ5 622 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 ATP6V0A1Q93050 837 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 LRIG1Q96JA1 1093 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 MYADMQ96S97 322 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 MYL10Q9BUA6 226 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 RNPEPQ9H4A4 650 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 DENND4AQ7Z401 1863 aa8.11□□□□□ -1.11
CTNNA1-216ENST00000519489 PATJQ8NI35 1801 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 FRMPD2Q68DX3 1309 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 IGKV6D-41A0A0C4DH26 115 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 KANSL1LA0AUZ9 987 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 FAM170BA6NMN3 283 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 TMEM232C9JQI7 657 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 GH1P01241 217 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 MGAT3Q09327 533 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 MTAPQ13126 283 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 SNW1Q13573 536 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 WTAPQ15007 396 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 PTPN14Q15678 1187 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 DGKDQ16760 1214 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 SLFNL1Q499Z3 407 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 C12orf60Q5U649 245 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 PDE12Q6L8Q7 609 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 GPR149Q86SP6 731 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 DHX37Q8IY37 1157 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 ZNF843Q8N446 348 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 FAM160A2Q8N612 972 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 CELF5Q8N6W0 485 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 MRPL43Q8N983 215 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 SLC22A17Q8WUG5 538 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 CLEC4DQ8WXI8 215 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 MRPS27Q92552 414 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 CLDN23Q96B33 292 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 C16orf70Q9BSU1 422 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 BCO2Q9BYV7 579 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 CWH43Q9H720 699 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 ENTPD7Q9NQZ7 604 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 SLC2A4RGQ9NR83 387 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 NYAP2Q9P242 653 aa8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 FCF1Q9Y324 198 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-216ENST00000519489 C17orf102A2RUQ5 167 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 SORBS3O60504 671 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 SMIM10L2AP0DMW4 78 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 SMIM10L2BP0DMW5 78 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 TARSP26639 723 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 GPC5P78333 572 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 ADAM17P78536 824 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 PLCB3Q01970 1234 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 PDE4DQ08499 809 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 FAM102BQ5T8I3 360 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 RUFY4Q6ZNE9 571 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 CCDC149Q6ZUS6 474 aa8.09□□□□□ -1.11
CTNNA1-216ENST00000519489 NPAS4Q8IUM7 802 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms