RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 FTOQ9C0B1 505 aaKnown RBP eCLIP24.65■■□□□ 1.54
VEGFA-217ENST00000518538 MTMR6Q9Y217 621 aa24.65■■□□□ 1.54
VEGFA-217ENST00000518538 SLITRK3O94933 977 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 CHRNA1P02708 482 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 PRPHP41219 470 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 MRPS6P82932 125 aaKnown RBP24.64■■□□□ 1.54
VEGFA-217ENST00000518538 MGAT3Q09327 533 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 RESTQ13127 1097 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 CTTNQ14247 550 aaKnown RBP24.64■■□□□ 1.54
VEGFA-217ENST00000518538 RASIP1Q5U651 963 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 ANO5Q75V66 913 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 OTOP2Q7RTS6 562 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 NME8Q8N427 588 aa24.64■■□□□ 1.54
VEGFA-217ENST00000518538 MTIF3Q9H2K0 278 aaKnown RBP24.64■■□□□ 1.54
VEGFA-217ENST00000518538 RANBP2P49792 3224 aaKnown RBP24.64■■□□□ 1.53
VEGFA-217ENST00000518538 TMEM150BA6NC51 233 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 ACTN1P12814 892 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 ATP2C1P98194 919 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-217ENST00000518538 TBC1D8BQ0IIM8 1120 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 MTERF2Q49AM1 385 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 IER5Q5VY09 327 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 TPH2Q8IWU9 490 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 KIAA0319LQ8IZA0 1049 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 CEP89Q96ST8 783 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 CDY2AQ9Y6F7 541 aa24.63■■□□□ 1.53
VEGFA-217ENST00000518538 M0QZ92 97 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 LYPLA2O95372 231 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 PDIA4P13667 645 aaKnown RBP24.62■■□□□ 1.53
VEGFA-217ENST00000518538 YWHABP31946 246 aaKnown RBP24.62■■□□□ 1.53
VEGFA-217ENST00000518538 PLA2G4FQ68DD2 849 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 CNKSR3Q6P9H4 555 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 METTL13Q8N6R0 699 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 ERMNQ8TAM6 284 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 TUFT1Q9NNX1 390 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 CYP26B1Q9NR63 512 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 PPME1Q9Y570 386 aa24.62■■□□□ 1.53
VEGFA-217ENST00000518538 TMOD1P28289 359 aa24.61■■□□□ 1.53
VEGFA-217ENST00000518538 PDIA5Q14554 519 aa24.61■■□□□ 1.53
VEGFA-217ENST00000518538 EFCAB12Q6NXP0 572 aa24.61■■□□□ 1.53
VEGFA-217ENST00000518538 OTUD6AQ7L8S5 288 aa24.61■■□□□ 1.53
VEGFA-217ENST00000518538 LINC01465Q8N7H1 131 aa24.61■■□□□ 1.53
VEGFA-217ENST00000518538 RAB34Q9BZG1 259 aa24.61■■□□□ 1.53
VEGFA-217ENST00000518538 TRPV2Q9Y5S1 764 aa24.61■■□□□ 1.53
VEGFA-217ENST00000518538 TRIOBPQ9H2D6 2365 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 BAIAP3O94812 1187 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 BMP15O95972 392 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 CLCN3P51790 818 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 PLEKHG4Q58EX7 1191 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 DTHD1Q6ZMT9 781 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 IGSF22Q8N9C0 903 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 CEP170P1Q96L14 293 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 SH2D3AQ9BRG2 576 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 POLR3CQ9BUI4 534 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-217ENST00000518538 ZSCAN16Q9H4T2 348 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-217ENST00000518538 CXXC1Q9P0U4 656 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-217ENST00000518538 KDM3AQ9Y4C1 1321 aa24.6■■□□□ 1.53
VEGFA-217ENST00000518538 SPATA31C1P0DKV0 1188 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 RPA1P27694 616 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 FXR1P51114 621 aaKnown RBP eCLIP24.59■■□□□ 1.53
VEGFA-217ENST00000518538 NPEPPSP55786 919 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 TMEM62Q0P6H9 643 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 IL17AQ16552 155 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 ARL6IP4Q66PJ3 421 aaKnown RBP24.59■■□□□ 1.53
VEGFA-217ENST00000518538 HAUS3Q68CZ6 603 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 CATSPER3Q86XQ3 398 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 LRRC71Q8N4P6 559 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 SPRYD3Q8NCJ5 442 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 MAP7D2Q96T17 732 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 JPH2Q9BR39 696 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-217ENST00000518538 CELF4Q9BZC1 486 aaKnown RBP24.59■■□□□ 1.53
VEGFA-217ENST00000518538 OSBPL7Q9BZF2 842 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 SUGCTQ9HAC7 445 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 LRWD1Q9UFC0 647 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 STK24Q9Y6E0 443 aa24.59■■□□□ 1.53
VEGFA-217ENST00000518538 IGKV6-21A0A0C4DH24 114 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 ZBBXA8MT70 800 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 SOX1O00570 391 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-217ENST00000518538 MAFO75444 373 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-217ENST00000518538 MED24O75448 989 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 GHRP10912 638 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 FBXO47Q5MNV8 452 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 EXOC8Q8IYI6 725 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 DBF4BQ8NFT6 615 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 SEPT8Q92599 483 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 ANKEF1Q9NU02 776 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 SQORQ9Y6N5 450 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 SIP14410 1827 aa24.58■■□□□ 1.53
VEGFA-217ENST00000518538 TET1Q8NFU7 2136 aa24.58■■□□□ 1.52
VEGFA-217ENST00000518538 ABHD14A-ACY1A0A1B0GW23 586 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 ZBTB39O15060 712 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 VTNP04004 478 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 MUTP22033 750 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 RFC5P40937 340 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 BECN1Q14457 450 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 LPIN1Q14693 890 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 SF3A1Q15459 793 aaKnown RBP24.57■■□□□ 1.52
VEGFA-217ENST00000518538 TCTN1Q2MV58 587 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 XKR9Q5GH70 373 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 ZNF710Q8N1W2 664 aa24.57■■□□□ 1.52
VEGFA-217ENST00000518538 ZNF579Q8NAF0 562 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms