RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 SLC26A4O43511 780 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 CUTAO60888 179 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 CLTBP09497 229 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 YWHABP31946 246 aaKnown RBP14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 RBL2Q08999 1139 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 GRB10Q13322 594 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 SPECC1Q5M775 1068 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 KRT79Q5XKE5 535 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 RUFY4Q6ZNE9 571 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 TRMT1LQ7Z2T5 733 aaKnown RBP14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 SH3RF1Q7Z6J0 888 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 CABP7Q86V35 215 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 C7orf61Q8IZ16 206 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 LINC01465Q8N7H1 131 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 SYMPKQ92797 1274 aaKnown RBP14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 TNPO1Q92973 898 aaKnown RBP14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 ZBTB10Q96DT7 871 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 NRBP2Q9NSY0 501 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 TUBE1Q9UJT0 475 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 PCDHA7Q9UN72 937 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 KDM3AQ9Y4C1 1321 aa14.05□□□□□ -0.16
IGHV3-6-201ENST00000518407 IGKV6-21A0A0C4DH24 114 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 TRIM43BA6NCK2 446 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 DDX11L8A8MPP1 907 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 GNAT1P11488 350 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 CYP2C9P11712 490 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 RARRES1P49788 294 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 NPEPPSP55786 919 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 IGBP1P78318 339 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 PTK7Q13308 1070 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 MTERF2Q49AM1 385 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 SHC4Q6S5L8 630 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 MTHFD1LQ6UB35 978 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 KCNK18Q7Z418 384 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 TRIM43Q96BQ3 446 aaPredicted RBP14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 EPSTI1Q96J88 318 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 SH2D3AQ9BRG2 576 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 NOC4LQ9BVI4 516 aaKnown RBP14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 SCAND2PQ9GZW5 306 aaPredicted RBP14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 CYP26B1Q9NR63 512 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 ANKEF1Q9NU02 776 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 DDX19AQ9NUU7 478 aaKnown RBP14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 DBR1Q9UK59 544 aaKnown RBP14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 PPME1Q9Y570 386 aa14.04□□□□□ -0.16
IGHV3-6-201ENST00000518407 A0A087WWV3 80 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 A0A087X0B3 334 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 KIAA0355O15063 1070 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 EVI5O60447 810 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 KLRC1P26715 233 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 KARSQ15046 597 aaKnown RBP14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 RPAINQ86UA6 219 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 PIGOQ8TEQ8 1089 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 NT5C3AQ9H0P0 336 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 DHX33Q9H6R0 707 aaKnown RBP14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 GDPD2Q9HCC8 539 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 PCDHA2Q9Y5H9 948 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 UMODL1Q5DID0 1318 aa14.03□□□□□ -0.16
IGHV3-6-201ENST00000518407 SMIM35A0A1B0GVV1 85 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 E9PMD0 336 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 MAFO75444 373 aaPredicted RBP14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 ITGB8P26012 769 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 UBA7P41226 1012 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 ME1P48163 572 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 XKR9Q5GH70 373 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 RESP18Q5W5W9 173 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 TAF2Q6P1X5 1199 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 TRAF7Q6Q0C0 670 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 OTUD6AQ7L8S5 288 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 KCTD17Q8N5Z5 321 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 CAGE1Q8TC20 777 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 DPF3Q92784 378 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 CEP170P1Q96L14 293 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 NACC1Q96RE7 527 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 XPNPEP1Q9NQW7 623 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 BLOC1S4Q9NUP1 217 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 TMEM39AQ9NV64 488 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.17
IGHV3-6-201ENST00000518407 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 MAGEB2O15479 319 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 EYA4O95677 639 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 PLCG1P19174 1290 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 RFC5P40937 340 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 CLCN3P51790 818 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 TBC1D8BQ0IIM8 1120 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 NAALADL2Q58DX5 795 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 ADALQ6DHV7 355 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 CALML4Q96GE6 196 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 PLIN2Q99541 437 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 WNT8AQ9H1J5 351 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 HIPK3Q9H422 1215 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 NOD1Q9Y239 953 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 GBF1Q92538 1859 aa14.01□□□□□ -0.17
IGHV3-6-201ENST00000518407 CAND2O75155 1236 aa14□□□□□ -0.17
IGHV3-6-201ENST00000518407 TIMP1P01033 207 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms