RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 BCAS3Q9H6U6 928 aa11.36□□□□□ -0.59
SH2D4A-202ENST00000518040 SUPT16HQ9Y5B9 1047 aaKnown RBP11.36□□□□□ -0.59
SH2D4A-202ENST00000518040 FRMPD4Q14CM0 1322 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 KDM3AQ9Y4C1 1321 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 EPG5Q9HCE0 2579 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 HAND2P61296 217 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 MRPS9P82933 396 aaKnown RBP11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 ATAT1Q5SQI0 421 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 MARCH8Q5T0T0 291 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 NLRX1Q86UT6 975 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 SEPT1Q8WYJ6 367 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 GLG1Q92896 1179 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 ACSF2Q96CM8 615 aaPredicted RBP11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 CDHR1Q96JP9 859 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 HINFPQ9BQA5 517 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 CYP26B1Q9NR63 512 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 TYW1Q9NV66 732 aaKnown RBP11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 DZANK1Q9NVP4 752 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 LIMD1Q9UGP4 676 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 DNAH14Q0VDD8 3507 aa11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 EP300Q09472 2414 aaPredicted RBP11.35□□□□□ -0.59
SH2D4A-202ENST00000518040 ASGR2P07307 311 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 MX1P20591 662 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 GATMP50440 423 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 MFAP1P55081 439 aaKnown RBP11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 TDGQ13569 410 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 SMC1AQ14683 1233 aaKnown RBP11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 KIAA1841Q6NSI8 718 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 SLC24A5Q71RS6 500 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 TMC7Q7Z402 723 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 CYP2W1Q8TAV3 490 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 CELF4Q9BZC1 486 aaKnown RBP11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 FAM49AQ9H0Q0 323 aaPredicted RBP11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 DBR1Q9UK59 544 aaKnown RBP11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 HCFC2Q9Y5Z7 792 aa11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 KMT2BQ9UMN6 2715 aaPredicted RBP11.34□□□□□ -0.59
SH2D4A-202ENST00000518040 DENND3A2RUS2 1198 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 HIDE1A8MVS5 230 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 KLRF2D3W0D1 207 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 ZNF213O14771 459 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 HOXA2O43364 376 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 EOMESO95936 686 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 NPR3P17342 541 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 SP4Q02446 784 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 SEMA3FQ13275 785 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 TBC1D10CQ8IV04 446 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 GPR161Q8N6U8 529 aaKnown RBP11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 SMOC2Q9H3U7 446 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 ELAC1Q9H777 363 aaKnown RBP11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 RGS18Q9NS28 235 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 RTEL1Q9NZ71 1219 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 FBXL21Q9UKT6 434 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 DUSP12Q9UNI6 340 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 PCDHA2Q9Y5H9 948 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 FNDC1Q4ZHG4 1894 aaPredicted RBP11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 DMXL1Q9Y485 3027 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 NCOR2Q9Y618 2525 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 PI15O43692 258 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 PPP1R11O60927 126 aaPredicted RBP11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 KRT76Q01546 638 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 NFX1Q12986 1120 aaKnown RBP11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 PCNX4Q63HM2 1172 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 OTOP3Q7RTS5 596 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 ENAHQ8N8S7 591 aaPredicted RBP11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 MRPL43Q8N983 215 aaKnown RBP11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 GPRASP2Q96D09 838 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 TMX1Q9H3N1 280 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 CWH43Q9H720 699 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 ATP6V0A4Q9HBG4 840 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 TMEM161AQ9NX61 479 aa11.33□□□□□ -0.6
SH2D4A-202ENST00000518040 NEDD4P46934 1319 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 SMIM35A0A1B0GVV1 85 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 CARNS1A5YM72 827 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 GPR182O15218 404 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 INSRRP14616 1297 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 MARK3P27448 753 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 PDE4AP27815 886 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 IGBP1P78318 339 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 GIT2Q14161 759 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 FAM102BQ5T8I3 360 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 KCNT2Q6UVM3 1135 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 TMEM87AQ8NBN3 555 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 ZNF558Q96NG5 402 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 ADAM2Q99965 735 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 TMEM117Q9H0C3 514 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 WNT16Q9UBV4 365 aa11.32□□□□□ -0.6
SH2D4A-202ENST00000518040 C9IYK1 514 aa11.31□□□□□ -0.6
SH2D4A-202ENST00000518040 MAFGO15525 162 aa11.31□□□□□ -0.6
SH2D4A-202ENST00000518040 RPS6KA5O75582 802 aa11.31□□□□□ -0.6
SH2D4A-202ENST00000518040 RFX1P22670 979 aa11.31□□□□□ -0.6
SH2D4A-202ENST00000518040 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.6
SH2D4A-202ENST00000518040 NONOQ15233 471 aaKnown RBP eCLIP11.31□□□□□ -0.6
SH2D4A-202ENST00000518040 KIAA0319Q5VV43 1072 aa11.31□□□□□ -0.6
SH2D4A-202ENST00000518040 SIX5Q8N196 739 aa11.31□□□□□ -0.6
SH2D4A-202ENST00000518040 LRRC43Q8N309 656 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms