RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 NRLP54845 237 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 RBM10P98175 930 aaKnown RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 KIF23Q02241 960 aaPredicted RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 PLAURQ03405 335 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 FAAP100Q0VG06 881 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 NOGQ13253 232 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 GRAMD1BQ3KR37 738 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 CERKLQ49MI3 558 aaPredicted RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 ACBD5Q5T8D3 534 aaPredicted RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 ERAP2Q6P179 960 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 CTR9Q6PD62 1173 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 ADAMTSL4Q6UY14 1074 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 RASAL3Q86YV0 1011 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 IFNL3Q8IZI9 196 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.21□□□□□ -1.95e-16■□□□□ 9.1
SKP1-204ENST00000517691 RUFY2Q8WXA3 655 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 OPTNQ96CV9 577 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 HHIPL1Q96JK4 782 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 NSUN5Q96P11 429 aaKnown RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 NECAB3Q96P71 396 aaPredicted RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 PNMA5Q96PV4 448 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 NT5C1AQ9BXI3 368 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 NAPBQ9H115 298 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 TMX1Q9H3N1 280 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 EFCC1Q9HA90 598 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 MKNK2Q9HBH9 465 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 DCP1AQ9NPI6 582 aaPredicted RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 HERC5Q9UII4 1024 aaKnown RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 SERPINB13Q9UIV8 391 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 MSRB2Q9Y3D2 182 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 ZHX2Q9Y6X8 837 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 CEP350Q5VT06 3117 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 ARAP2Q8WZ64 1704 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 FAM155AB1AL88 458 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 J3QW42 95 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SLC26A4O43511 780 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 AKAP10O43572 662 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CTNND1O60716 968 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 PAGE1O75459 146 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PF4P02776 101 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 HSP90AA1P07900 732 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 SLC3A2P08195 630 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 PTPRAP18433 802 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 TFE3P19532 575 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 RRM1P23921 792 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CHMLP26374 656 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 MAP2K2P36507 400 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CAP2P40123 477 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SOX9P48436 509 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 LIG3P49916 1009 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 MAP2K1Q02750 393 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 FAM160A1Q05DH4 1040 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 RAB3GAP1Q15042 981 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 LONRF1Q17RB8 773 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ABCB5Q2M3G0 1257 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 RASIP1Q5U651 963 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 VPS53Q5VIR6 699 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CASC1Q6TDU7 716 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 AGMOQ6ZNB7 445 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 KIAA1211Q6ZU35 1233 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ZNF589Q86UQ0 364 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 THNSL2Q86YJ6 484 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SUGP1Q8IWZ8 645 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 SCYL3Q8IZE3 742 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ZNF444Q8N0Y2 327 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 SPICE1Q8N0Z3 855 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 TMEM102Q8N9M5 508 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 DYNLL2Q96FJ2 89 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 WNK4Q96J92 1243 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 RBSNQ9H1K0 784 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CABP5Q9NP86 173 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 TOMM22Q9NS69 142 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 ARPP21Q9UBL0 812 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 ZNF112Q9UJU3 913 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SNCAIPQ9Y6H5 919 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ADAMTSL1Q8N6G6 1762 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 RFX7Q2KHR2 1363 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ATRNL1Q5VV63 1379 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 RPAP1Q9BWH6 1393 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 CCDC171Q6TFL3 1326 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 A0A096LPE4 126 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 A0A1W2PPZ6 126 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 MANSC4A6NHS7 340 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 TRIM75PA6NK02 468 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PRSS47A8MTI9 375 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 RBAK-RBAKDNI3L0D1 243 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SMIM22K7EJ46 135 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PDE2AO00408 941 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 ZNF213O14771 459 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SMAD7O15105 426 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 PRDM1O75626 825 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 GH2P01242 217 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ZBTB48P10074 688 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 HSPD1P10809 573 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 CETPP11597 493 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 MYCLP1P12525 358 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 CDK8P49336 464 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 NEK3P51956 506 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms