RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 SMOC1Q9H4F8 434 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 ZHX3Q9H4I2 956 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 ANLNQ9NQW6 1124 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 KCNH7Q9NS40 1196 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 DDX20Q9UHI6 824 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 GPR160Q9UJ42 338 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 CTNND2Q9UQB3 1225 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 ZC3H12DA2A288 527 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 KRIT1O00522 736 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 ZNF500O60304 480 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 MYL3P08590 195 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 FAM163BP0C2L3 166 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 CT47B1P0C2W7 299 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 PF4V1P10720 104 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 COL6A1P12109 1028 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 GDNFP39905 211 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 HALP42357 657 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 MOGSQ13724 837 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 SIM2Q14190 667 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 ZNF174Q15697 407 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 MINDY4Q4G0A6 757 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 GPR158Q5T848 1215 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 BTBD8Q5XKL5 378 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 SKAP1Q86WV1 359 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 SPPL2CQ8IUH8 684 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 OXR1Q8N573 874 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 ENAHQ8N8S7 591 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 TGFBRAP1Q8WUH2 860 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 PDGFDQ9GZP0 370 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 PCIF1Q9H4Z3 704 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 BCAS3Q9H6U6 928 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 AS3MTQ9HBK9 375 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 ZNF652Q9Y2D9 606 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 SCINQ9Y6U3 715 aa7.06□□□□□ -1.28
CTNNA1-202ENST00000517533 ANO9A1A5B4 782 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 KLRG2A4D1S0 409 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 EXOC5O00471 708 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 HIP1RO75146 1068 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 IGHA1P01876 353 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 RBP3P10745 1247 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 LSP1P33241 339 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 MAN1A1P33908 653 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 CYP4F22Q6NT55 531 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 EPM2AIP1Q7L775 607 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 NLGN4XQ8N0W4 816 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 NETO2Q8NC67 525 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 PARD3BQ8TEW8 1205 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 FOXRED1Q96CU9 486 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 SLC13A1Q9BZW2 595 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 INO80BQ9C086 356 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 RNF32Q9H0A6 362 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 PRDM12Q9H4Q4 367 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 NGRNQ9NPE2 291 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 RIC8BQ9NVN3 520 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 PCDHB4Q9Y5E5 795 aa7.05□□□□□ -1.28
CTNNA1-202ENST00000517533 GOLGA8AA7E2F4 631 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 GOLGA8BA8MQT2 603 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 SRGAP3O43295 1099 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 KDM1AO60341 852 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 NBNO60934 754 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 MMEP08473 750 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 SRGNP10124 158 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 PNLIPP16233 465 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 SDHAP31040 664 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 HTRA3P83110 453 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 GBX1Q14549 363 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 PLCL1Q15111 1095 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 SAFBQ15424 915 aaKnown RBP eCLIP7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 FYB2Q5VWT5 728 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 PGM2L1Q6PCE3 622 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 TOGARAM2Q6ZUX3 1019 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 MILR1Q7Z6M3 343 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 RTN4RL1Q86UN2 441 aaPredicted RBP7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 SMAP1Q8IYB5 467 aaPredicted RBP7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 CPXCR1Q8N123 301 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 SEC14L1Q92503 715 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 RUNDC1Q96C34 613 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 CLIP3Q96DZ5 547 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 NEUROD6Q96NK8 337 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 TCF7L1Q9HCS4 588 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 ACSS2Q9NR19 701 aa7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 NOC2LQ9Y3T9 749 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-202ENST00000517533 TRIM75PA6NK02 468 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 CCER2I3L3R5 266 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 ELL2O00472 640 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 SLC26A4O43511 780 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 ZRANB2O95218 330 aaKnown RBP eCLIP7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 LDHCP07864 332 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 LPOP22079 712 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 ZNF280AP59817 542 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 ZNF792Q3KQV3 632 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 ZBTB41Q5SVQ8 909 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 CYB5RLQ6IPT4 315 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 DCP2Q8IU60 420 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 ASB15Q8WXK1 588 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 MYLIPQ8WY64 445 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 LRGUKQ96M69 825 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 ORAI2Q96SN7 254 aa7.03□□□□□ -1.28
CTNNA1-202ENST00000517533 SLC12A5Q9H2X9 1139 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms