RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 C1orf112Q9NSG2 853 aa16.59■□□□□ 0.25
SCARNA20.5-201ENST00000516991 TBC1D22BQ9NU19 505 aa16.59■□□□□ 0.25
SCARNA20.5-201ENST00000516991 EVPLQ92817 2033 aa16.58■□□□□ 0.25
SCARNA20.5-201ENST00000516991 IGLV3-22A0A075B6J6 115 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 FAM86B1E9PN63 330 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 DCXO43602 365 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 RPS6KA5O75582 802 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 FAM86B2P0C5J1 330 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 LTBRP36941 435 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SMAD4Q13485 552 aaKnown RBP16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PAN2Q504Q3 1202 aaKnown RBP16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ZNF746Q6NUN9 644 aaPredicted RBP16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SMAP1Q8IYB5 467 aaPredicted RBP16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ZNF577Q9BSK1 485 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 UPF3BQ9BZI7 483 aaKnown RBP16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 TMX1Q9H3N1 280 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ERVK-5Q9HDB9 667 aa16.58■□□□□ 0.24
SCARNA20.5-201ENST00000516991 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 DHX15O43143 795 aaKnown RBP16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ITGB1P05556 798 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 GNA11P29992 359 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ADD1P35611 737 aaKnown RBP16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 NFX1Q12986 1120 aaKnown RBP16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SMAD2Q15796 467 aaKnown RBP16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CKAP2LQ8IYA6 745 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 KIAA0319LQ8IZA0 1049 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 BICD2Q8TD16 824 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 FAM167AQ96KS9 214 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ALG13Q9NP73 1137 aaKnown RBP16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CEP131Q9UPN4 1083 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 GINS2Q9Y248 185 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PCDHB7Q9Y5E2 793 aa16.57■□□□□ 0.24
SCARNA20.5-201ENST00000516991 FSD2A1L4K1 749 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 GPR182O15218 404 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 MBTPS2O43462 519 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 TBX10O75333 385 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 C22orf31O95567 290 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PSAPP07602 524 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 AKAP17AQ02040 695 aaKnown RBP16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 UBE3AQ05086 875 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 APOBRQ0VD83 1088 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CSPP1Q1MSJ5 1256 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 TMEM266Q2M3C6 531 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SWSAP1Q6NVH7 229 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 BLOC1S2Q6QNY1 142 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ZNF710Q8N1W2 664 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 KLHL23Q8NBE8 558 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CCDC148Q8NFR7 591 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SPPL3Q8TCT6 385 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 KCNB2Q92953 911 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 BRF1Q92994 677 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 JAKMIP1Q96N16 626 aaKnown RBP16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 AAASQ9NRG9 546 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CD207Q9UJ71 328 aa16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 MAFBQ9Y5Q3 323 aaPredicted RBP16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 FNDC1Q4ZHG4 1894 aaPredicted RBP16.56■□□□□ 0.24
SCARNA20.5-201ENST00000516991 MUC6Q6W4X9 2439 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ZBTB42B2RXF5 422 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CSPG5O95196 566 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CIITAP33076 1130 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 NDUFV1P49821 464 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CRYBB1P53674 252 aaPredicted RBP16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ADAM15Q13444 863 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CAMK1Q14012 370 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 Q6ZUG5 572 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SLC24A5Q71RS6 500 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 FBXL16Q8N461 479 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ADAM2Q99965 735 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 IGFLR1Q9H665 355 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 RGS18Q9NS28 235 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 NOC2LQ9Y3T9 749 aaKnown RBP16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PCDHB12Q9Y5F1 795 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PCDHA10Q9Y5I2 948 aa16.55■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PLXNA4Q9HCM2 1894 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 WDR64B1ANS9 1081 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 C9IYK1 514 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 MAGEB2O15479 319 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 MGEA5O60502 916 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ATP4AP20648 1035 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 DLX2Q07687 328 aaPredicted RBP16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CLUL1Q15846 466 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PRR16Q569H4 304 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SPOUT1Q5T280 376 aaKnown RBP16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 EFHBQ8N7U6 833 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 POF1BQ8WVV4 589 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 TMEM40Q8WWA1 233 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 MAP7D2Q96T17 732 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 RNF26Q9BY78 433 aaPredicted RBP16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ST3GAL5Q9UNP4 418 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 WDR81Q562E7 1941 aa16.54■□□□□ 0.24
SCARNA20.5-201ENST00000516991 TBKBP1A7MCY6 615 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 LINC01565O15544 149 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 EYA4O95677 639 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CPA1P15085 419 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 IBSPP21815 317 aaPredicted RBP16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 DNAJB1P25685 340 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms