RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 BAIAP3O94812 1187 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 CTSHP09668 335 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 SYT1P21579 422 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 TECP42680 631 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 PTGDRQ13258 359 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 IKBKEQ14164 716 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 NBR1Q14596 966 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 TCTN1Q2MV58 587 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 EFCAB12Q6NXP0 572 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 TPH2Q8IWU9 490 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 PHOSPHO2Q8TCD6 241 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 DYDC2Q96IM9 177 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 EIF2AK1Q9BQI3 630 aaKnown RBP12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 FAM49AQ9H0Q0 323 aaPredicted RBP12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 ZSWIM4Q9H7M6 989 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 SLC4A7Q9Y6M7 1214 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 SQORQ9Y6N5 450 aa12.51□□□□□ -0.41
SCARNA20-201ENST00000516768 MYH9P35579 1960 aaKnown RBP12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 IGKV6-21A0A0C4DH24 114 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 LAD1O00515 517 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 LYPLA2O95372 231 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 OR52Z1P0C646 297 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 XRCC6P12956 609 aaKnown RBP eCLIP12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 TMOD1P28289 359 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 MRPS6P82932 125 aaKnown RBP12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 CTTNQ14247 550 aaKnown RBP12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 FAM109BQ6ICB4 259 aaPredicted RBP12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 ZNF710Q8N1W2 664 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 METTL13Q8N6R0 699 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 LINC01465Q8N7H1 131 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 USP38Q8NB14 1042 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 SEPT8Q92599 483 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 SUGCTQ9HAC7 445 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 CDY2AQ9Y6F7 541 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 KDM3AQ9Y4C1 1321 aa12.5□□□□□ -0.41
SCARNA20-201ENST00000516768 LAMA2P24043 3122 aaKnown RBP12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 SCN5AQ14524 2016 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 GRXCR1A8MXD5 290 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 RBAK-RBAKDNI3L0D1 243 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 M0QZ92 97 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 ZBTB39O15060 712 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 EFCAB14O75071 495 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 GPR32O75388 356 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 MAFO75444 373 aaPredicted RBP12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 SPATA31C1P0DKV0 1188 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 YWHABP31946 246 aaKnown RBP12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 PRPHP41219 470 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 NPEPPSP55786 919 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 CYP4A11Q02928 519 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 TBC1D8BQ0IIM8 1120 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 LPIN1Q14693 890 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 MTERF2Q49AM1 385 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 CATSPER3Q86XQ3 398 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 EXOC8Q8IYI6 725 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 ZNF579Q8NAF0 562 aaKnown RBP12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 NEK9Q8TD19 979 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 APBB2Q92870 758 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 SH2D3AQ9BRG2 576 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 LXNQ9BS40 222 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 POLR3CQ9BUI4 534 aaPredicted RBP12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 CYP26B1Q9NR63 512 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 PPME1Q9Y570 386 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 TRPV2Q9Y5S1 764 aa12.49□□□□□ -0.41
SCARNA20-201ENST00000516768 POTEMA6NI47 508 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 GHRP10912 638 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 RPA1P27694 616 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 DNM2P50570 870 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 CLCN3P51790 818 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 CRYBB1P53674 252 aaPredicted RBP12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 WDR5P61964 334 aaKnown RBP12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 CDC42EP1Q00587 391 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 IL17AQ16552 155 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 FAM43BQ6ZT52 329 aaPredicted RBP12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 LRRC71Q8N4P6 559 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 IGSF22Q8N9C0 903 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 CEP170P1Q96L14 293 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 IFIH1Q9BYX4 1025 aaKnown RBP12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 AGO3Q9H9G7 860 aaKnown RBP12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 TUFT1Q9NNX1 390 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 ANKEF1Q9NU02 776 aa12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 SEPT9Q9UHD8 586 aaPredicted RBP12.48□□□□□ -0.41
SCARNA20-201ENST00000516768 VPS37CA5D8V6 355 aaPredicted RBP12.47□□□□□ -0.41
SCARNA20-201ENST00000516768 ENPP3O14638 875 aa12.47□□□□□ -0.41
SCARNA20-201ENST00000516768 VTNP04004 478 aa12.47□□□□□ -0.41
SCARNA20-201ENST00000516768 PDIA4P13667 645 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms