RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PCDHA8Q9Y5H6 950 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.81□□□□□ -1.64
HERC4-215ENST00000515753 TCRBV5S4A2TA0A5A2 114 aa4.81□□□□□ -1.64
HERC4-215ENST00000515753 APPP05067 770 aa4.81□□□□□ -1.64
HERC4-215ENST00000515753 C1SP09871 688 aa4.81□□□□□ -1.64
HERC4-215ENST00000515753 TOP3AQ13472 1001 aaPredicted RBP4.81□□□□□ -1.64
HERC4-215ENST00000515753 NOP9Q86U38 636 aaKnown RBP4.81□□□□□ -1.64
HERC4-215ENST00000515753 C1orf210Q8IVY1 113 aa4.81□□□□□ -1.64
HERC4-215ENST00000515753 MAGEB10Q96LZ2 347 aaPredicted RBP4.81□□□□□ -1.64
HERC4-215ENST00000515753 IKZF4Q9H2S9 585 aa4.81□□□□□ -1.64
HERC4-215ENST00000515753 C12orf65Q9H3J6 166 aaKnown RBP4.81□□□□□ -1.64
HERC4-215ENST00000515753 KANSL2Q9H9L4 492 aa4.81□□□□□ -1.64
HERC4-215ENST00000515753 CBLCQ9ULV8 474 aa4.81□□□□□ -1.64
HERC4-215ENST00000515753 PCDHA9Q9Y5H5 950 aa4.81□□□□□ -1.64
HERC4-215ENST00000515753 CCDC66A2RUB6 948 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 B4E1Z4 1266 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 MAN2B1O00754 1011 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 ENPP3O14638 875 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 CLASP2O75122 1294 aaKnown RBP4.8□□□□□ -1.64
HERC4-215ENST00000515753 RAD17O75943 681 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 RASGRP1O95267 797 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 AMY2AP04746 511 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 AMY2BP19961 511 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 DBPQ10586 325 aaPredicted RBP4.8□□□□□ -1.64
HERC4-215ENST00000515753 TBR1Q16650 682 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 BTBD8Q5XKL5 378 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 HOMER1Q86YM7 354 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 ZC3H7AQ8IWR0 971 aaKnown RBP4.8□□□□□ -1.64
HERC4-215ENST00000515753 PLEKHG4BQ96PX9 1271 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 PLA2G12BQ9BX93 195 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 TRIM8Q9BZR9 551 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 KIAA1683Q9H0B3 1180 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 SMURF1Q9HCE7 757 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 INTS7Q9NVH2 962 aaKnown RBP4.8□□□□□ -1.64
HERC4-215ENST00000515753 RIC8BQ9NVN3 520 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 NR2E1Q9Y466 385 aa4.8□□□□□ -1.64
HERC4-215ENST00000515753 FAM90A27PA6NNH2 459 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 MATN2O00339 956 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 PYGMP11217 842 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 PDE6AP16499 860 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 KCNA6P17658 529 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 TGM1P22735 817 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 IGFALSP35858 605 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 ADCY8P40145 1251 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 KCNQ1P51787 676 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 ST5P78524 1137 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 TCEA2Q15560 299 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 CRY1Q16526 586 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 WDR72Q3MJ13 1102 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 ARHGAP36Q6ZRI8 547 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 OTOP1Q7RTM1 612 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 POLNQ7Z5Q5 900 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 FGD2Q7Z6J4 655 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 JAZF1Q86VZ6 243 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 NOSTRINQ8IVI9 506 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 ZNF808Q8N4W9 903 aaPredicted RBP4.79□□□□□ -1.64
HERC4-215ENST00000515753 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 NEU4Q8WWR8 484 aaPredicted RBP4.79□□□□□ -1.64
HERC4-215ENST00000515753 CEP89Q96ST8 783 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 ARHGAP28Q9P2N2 729 aa4.79□□□□□ -1.64
HERC4-215ENST00000515753 WDR33Q9C0J8 1336 aaKnown RBP4.78□□□□□ -1.64
HERC4-215ENST00000515753 SHROOM4Q9ULL8 1493 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 CUTAO60888 179 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 IGSF3O75054 1194 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 ASLP04424 464 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 PTPN1P18031 435 aaKnown RBP4.78□□□□□ -1.64
HERC4-215ENST00000515753 MCM7P33993 719 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 MECP2P51608 486 aaKnown RBP4.78□□□□□ -1.64
HERC4-215ENST00000515753 HERVK_113P62684 666 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 SMN1Q16637 294 aaKnown RBP4.78□□□□□ -1.64
HERC4-215ENST00000515753 ZMAT1Q5H9K5 638 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 DPP8Q6V1X1 898 aaPredicted RBP4.78□□□□□ -1.64
HERC4-215ENST00000515753 C16orf86Q6ZW13 317 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 LARP4Q71RC2 724 aaKnown RBP eCLIP4.78□□□□□ -1.64
HERC4-215ENST00000515753 OVCH1Q7RTY7 1134 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 APPBP2Q92624 585 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 CLUHP3Q96NS8 147 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 ORAI3Q9BRQ5 295 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 CATSPERZQ9NTU4 200 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 CDC42EP3Q9UKI2 254 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 TBX22Q9Y458 520 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 ATP23Q9Y6H3 246 aa4.78□□□□□ -1.64
HERC4-215ENST00000515753 DNAJC8O75937 253 aaPredicted RBP4.77□□□□□ -1.65
HERC4-215ENST00000515753 RAPGEF3O95398 923 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 JAM2P57087 298 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 IL13RA1P78552 427 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 FOXL1Q12952 345 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 DUSP8Q13202 625 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 TMEM177Q53S58 311 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 ZCCHC8Q6NZY4 707 aaKnown RBP4.77□□□□□ -1.65
HERC4-215ENST00000515753 ABHD17CQ6PCB6 329 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 MAMDC4Q6UXC1 1216 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 FAM89AQ96GI7 184 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 FEZ1Q99689 392 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 MAGEC2Q9UBF1 373 aaPredicted RBP4.77□□□□□ -1.65
HERC4-215ENST00000515753 PLAAQ9Y263 795 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 SLC30A1Q9Y6M5 507 aa4.77□□□□□ -1.65
HERC4-215ENST00000515753 KCNK3O14649 394 aa4.76□□□□□ -1.65
HERC4-215ENST00000515753 PPP1R12AO14974 1030 aaPredicted RBP4.76□□□□□ -1.65
HERC4-215ENST00000515753 ARHGAP6O43182 974 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms