RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 RPAINQ86UA6 219 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 RTN4RL1Q86UN2 441 aaPredicted RBP12.96□□□□□ -0.33
VCAN-212ENST00000515397 LRRC71Q8N4P6 559 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 BANK1Q8NDB2 785 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 SUGCTQ9HAC7 445 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 PRDM6Q9NQX0 595 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 A0A0C4DFX4 3053 aa12.96□□□□□ -0.34
VCAN-212ENST00000515397 CHD7Q9P2D1 2997 aa12.96□□□□□ -0.34
VCAN-212ENST00000515397 SMIM35A0A1B0GVV1 85 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 ENPP3O14638 875 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 GJB5O95377 273 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 C22orf31O95567 290 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 AMHP03971 560 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 OATP04181 439 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 JAK3P52333 1124 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
VCAN-212ENST00000515397 IER5Q5VY09 327 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 EFCAB12Q6NXP0 572 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 MOXD1Q6UVY6 613 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 B3GNT9Q6UX72 402 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 FAM177A1Q8N128 213 aaPredicted RBP12.95□□□□□ -0.34
VCAN-212ENST00000515397 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
VCAN-212ENST00000515397 TNPO1Q92973 898 aaKnown RBP12.95□□□□□ -0.34
VCAN-212ENST00000515397 C8orf76Q96K31 380 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 ZSCAN31Q96LW9 406 aaPredicted RBP12.95□□□□□ -0.34
VCAN-212ENST00000515397 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
VCAN-212ENST00000515397 RAD9AQ99638 391 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 CELF4Q9BZC1 486 aaKnown RBP12.95□□□□□ -0.34
VCAN-212ENST00000515397 BRMS1Q9HCU9 246 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 KCNMB3Q9NPA1 279 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 NRBP2Q9NSY0 501 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 RGL1Q9NZL6 768 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 TRPV2Q9Y5S1 764 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 GBF1Q92538 1859 aa12.95□□□□□ -0.34
VCAN-212ENST00000515397 IGSF9BQ9UPX0 1349 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 A0A087WWV3 80 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 ZBTB39O15060 712 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 STBD1O95210 358 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 SFNP31947 248 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 NFX1Q12986 1120 aaKnown RBP12.94□□□□□ -0.34
VCAN-212ENST00000515397 DRP2Q13474 957 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 RABEP1Q15276 862 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 MTERF2Q49AM1 385 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 NCAPH2Q6IBW4 605 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
VCAN-212ENST00000515397 TMEM40Q8WWA1 233 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 WRAP73Q9P2S5 460 aaPredicted RBP12.94□□□□□ -0.34
VCAN-212ENST00000515397 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
VCAN-212ENST00000515397 VAV3Q9UKW4 847 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 PADI3Q9ULW8 664 aa12.94□□□□□ -0.34
VCAN-212ENST00000515397 NOC2LQ9Y3T9 749 aaKnown RBP12.94□□□□□ -0.34
VCAN-212ENST00000515397 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 M0QZ92 97 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 EFCAB14O75071 495 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
VCAN-212ENST00000515397 NPEPPSP55786 919 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 CTTNQ14247 550 aaKnown RBP12.93□□□□□ -0.34
VCAN-212ENST00000515397 ZNF174Q15697 407 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 PLA2G4FQ68DD2 849 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 TSHZ1Q6ZSZ6 1077 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 NME8Q8N427 588 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 LINC01599Q8WXQ3 324 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 TOP1MTQ969P6 601 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 OSMRQ99650 979 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 C17orf80Q9BSJ5 609 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 TMEM60Q9H2L4 133 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 TMX1Q9H3N1 280 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 UPF2Q9HAU5 1272 aaKnown RBP12.93□□□□□ -0.34
VCAN-212ENST00000515397 SH2B1Q9NRF2 756 aaPredicted RBP12.93□□□□□ -0.34
VCAN-212ENST00000515397 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
VCAN-212ENST00000515397 AKT3Q9Y243 479 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 PTPRSQ13332 1948 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 EYSQ5T1H1 3165 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 EVPLQ92817 2033 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 COL1A2P08123 1366 aa12.93□□□□□ -0.34
VCAN-212ENST00000515397 PRUNE2Q8WUY3 3088 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 PRRC2BQ5JSZ5 2229 aaKnown RBP12.92□□□□□ -0.34
VCAN-212ENST00000515397 MGEA5O60502 916 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 GPR32O75388 356 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 GCFC2P16383 781 aaKnown RBP12.92□□□□□ -0.34
VCAN-212ENST00000515397 FGFR4P22455 802 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 MCM7P33993 719 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 TXKP42681 527 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 NLRP11P59045 1033 aaKnown RBP12.92□□□□□ -0.34
VCAN-212ENST00000515397 CYP4A11Q02928 519 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 PAK2Q13177 524 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 PPP2R5CQ13362 524 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 NBR1Q14596 966 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
VCAN-212ENST00000515397 CALCRLQ16602 461 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 ANO5Q75V66 913 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 GDPD5Q8WTR4 605 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 APBB2Q92870 758 aa12.92□□□□□ -0.34
VCAN-212ENST00000515397 DYDC2Q96IM9 177 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms