RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 ACTRT1Q8TDG2 376 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 A6NNZ2 444 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 PSMD10O75832 226 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 RBM5P52756 815 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX2-213ENST00000514949 RPS6KA1Q15418 735 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 TUBB8Q3ZCM7 444 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 ALKBH5Q6P6C2 394 aaKnown RBP19.15■□□□□ 0.66
SNX2-213ENST00000514949 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.15■□□□□ 0.66
SNX2-213ENST00000514949 FLAD1Q8NFF5 587 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 HINFPQ9BQA5 517 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 UBE4BO95155 1302 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 A0A1W2PRG0 241 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 HEXIM1O94992 359 aaKnown RBP19.15■□□□□ 0.66
SNX2-213ENST00000514949 KIF4AO95239 1232 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 GH2P01242 217 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 NPEPPSP55786 919 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 CYP4A11Q02928 519 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 SLC20A2Q08357 652 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 STYK1Q6J9G0 422 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 C1orf131Q8NDD1 294 aaKnown RBP19.15■□□□□ 0.66
SNX2-213ENST00000514949 SCFD2Q8WU76 684 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 SLC5A5Q92911 643 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 CALR3Q96L12 384 aaKnown RBP19.15■□□□□ 0.66
SNX2-213ENST00000514949 SEL1LQ9UBV2 794 aa19.15■□□□□ 0.66
SNX2-213ENST00000514949 BHMG1C9JSJ3 638 aaPredicted RBP19.14■□□□□ 0.65
SNX2-213ENST00000514949 HSF2BPO75031 334 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 SLITRK3O94933 977 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 GCNT3O95395 438 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 MMP10P09238 476 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 HOXA13P31271 388 aaPredicted RBP19.14■□□□□ 0.65
SNX2-213ENST00000514949 CARSP49589 748 aaKnown RBP19.14■□□□□ 0.65
SNX2-213ENST00000514949 CASP4P49662 377 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 ZNF131P52739 623 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 TNNC1P63316 161 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 MRPS25P82663 173 aaKnown RBP19.14■□□□□ 0.65
SNX2-213ENST00000514949 EMC10Q5UCC4 262 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 VPS36Q86VN1 386 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 CD302Q8IX05 232 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 WHAMMQ8TF30 809 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 TAF4BQ92750 862 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 RGL1Q9NZL6 768 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 KCND2Q9NZV8 630 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 HERC5Q9UII4 1024 aaKnown RBP19.14■□□□□ 0.65
SNX2-213ENST00000514949 DAAM1Q9Y4D1 1078 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 ZMYM2Q9UBW7 1377 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 BRWD3Q6RI45 1802 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 SLX4Q8IY92 1834 aa19.14■□□□□ 0.65
SNX2-213ENST00000514949 FERP16591 822 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 ZNF76P36508 570 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 SKOR1P84550 965 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 IKQ13123 557 aaPredicted RBP19.13■□□□□ 0.65
SNX2-213ENST00000514949 RRP1BQ14684 758 aaKnown RBP19.13■□□□□ 0.65
SNX2-213ENST00000514949 EPB41L5Q9HCM4 733 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 RRP15Q9Y3B9 282 aaKnown RBP19.13■□□□□ 0.65
SNX2-213ENST00000514949 MYO1CO00159 1063 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 PSMC2P35998 433 aaKnown RBP19.13■□□□□ 0.65
SNX2-213ENST00000514949 DCAF17Q5H9S7 520 aaPredicted RBP19.13■□□□□ 0.65
SNX2-213ENST00000514949 FOXR1Q6PIV2 292 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 TPCN2Q8NHX9 752 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 LMBR1Q8WVP7 490 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 FIZ1Q96SL8 496 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 KRT12Q99456 494 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 WDR18Q9BV38 432 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 QTRT2Q9H974 415 aaKnown RBP19.13■□□□□ 0.65
SNX2-213ENST00000514949 GCNT4Q9P109 453 aa19.13■□□□□ 0.65
SNX2-213ENST00000514949 FRMPD4Q14CM0 1322 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 STAT2P52630 851 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 GUCY2DQ02846 1103 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 KCNA1Q09470 495 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 DMAC2Q9NW81 257 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 FEZ2Q9UHY8 353 aaPredicted RBP19.12■□□□□ 0.65
SNX2-213ENST00000514949 NFU1Q9UMS0 254 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 PACSIN2Q9UNF0 486 aaPredicted RBP19.12■□□□□ 0.65
SNX2-213ENST00000514949 SMCHD1A6NHR9 2005 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 PLSCR1O15162 318 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 FAM13AO94988 1023 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 H2AFZP0C0S5 128 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 IRAK1P51617 712 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 ENOX2Q16206 610 aaKnown RBP19.12■□□□□ 0.65
SNX2-213ENST00000514949 CC2D2BQ6DHV5 1058 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 H2AFVQ71UI9 128 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 SLC30A5Q8TAD4 765 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 OLIG1Q8TAK6 271 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 CASKIN2Q8WXE0 1202 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 ZNF622Q969S3 477 aaKnown RBP eCLIP19.12■□□□□ 0.654e-6■□□□□ 8.2
SNX2-213ENST00000514949 ZIM3Q96PE6 472 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 TDRD3Q9H7E2 651 aaKnown RBP19.12■□□□□ 0.65
SNX2-213ENST00000514949 PARVGQ9HBI0 331 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 SUCLA2Q9P2R7 463 aaPredicted RBP19.12■□□□□ 0.65
SNX2-213ENST00000514949 LCMT1Q9UIC8 334 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 AJAP1Q9UKB5 411 aaPredicted RBP19.12■□□□□ 0.65
SNX2-213ENST00000514949 STXBP5LQ9Y2K9 1186 aa19.12■□□□□ 0.65
SNX2-213ENST00000514949 RBBP6Q7Z6E9 1792 aaKnown RBP19.11■□□□□ 0.65
SNX2-213ENST00000514949 SHTN1A0MZ66 631 aa19.11■□□□□ 0.65
SNX2-213ENST00000514949 PPP1R12BO60237 982 aaPredicted RBP19.11■□□□□ 0.65
SNX2-213ENST00000514949 PLA2G6O60733 806 aa19.11■□□□□ 0.65
SNX2-213ENST00000514949 POLD1P28340 1107 aa19.11■□□□□ 0.65
SNX2-213ENST00000514949 LRCH2Q5VUJ6 765 aa19.11■□□□□ 0.65
SNX2-213ENST00000514949 B3GNT9Q6UX72 402 aa19.11■□□□□ 0.65
SNX2-213ENST00000514949 FMNL3Q8IVF7 1028 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms